RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 HLA-DOBP13765 273 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 WT1P19544 449 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 CD33P20138 364 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 UCNP55089 124 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 PPP1CBP62140 327 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 SRPXP78539 464 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 ROM1Q03395 351 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 VHLLQ6RSH7 139 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 CLDND2Q8NHS1 167 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 LYRM2Q9NU23 88 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 TUBD1Q9UJT1 453 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 RAXQ9Y2V3 346 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 CHD3Q12873 2000 aaKnown RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 ZNF16P17020 682 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 RAC3P60763 192 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 LINC00114Q6XXX2 140 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 MYPOPQ86VE0 399 aaPredicted RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 FBXL14Q8N1E6 418 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 TMEM252Q8N6L7 170 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 SPTAN1Q13813 2472 aaKnown RBP9.39□□□□□ -0.91
LSM3-201ENST00000306024 DOCK7Q96N67 2140 aa9.39□□□□□ -0.91
LSM3-201ENST00000306024 KMT2EQ8IZD2 1858 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 LOC102723971A0A1B0GUV8 181 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 NKX2-6A6NCS4 301 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 CRYM-AS1A6NIL9 109 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZIC3O60481 467 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 RBMXL2O75526 392 aaKnown RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 CELA3AP09093 270 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF17P17021 662 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 AADACP22760 399 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 HOXC12P31275 282 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 CEACAM6P40199 344 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 RPL19P84098 196 aaKnown RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ASPHD2Q6ICH7 369 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 C5orf24Q7Z6I8 188 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF596Q8TC21 504 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF385AQ96PM9 386 aaKnown RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ATP5SQ99766 215 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 PECRQ9BY49 303 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 POLR3KQ9Y2Y1 108 aaPredicted RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF292O60281 2723 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 A0A1B0GW64 132 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 TMEM210A6NLX4 147 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 TMEM14DPA8MWL7 114 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 PITX3O75364 302 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZNF737O75373 536 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 HRASP01112 189 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 TMPRSS3P57727 454 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 C12orf49Q9H741 205 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 SDF2L1Q9HCN8 221 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 SLC2A9Q9NRM0 540 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 RPH3ALQ9UNE2 315 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 MUC3AQ02505 3323 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 PINLYPA6NC86 204 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 DKK1O94907 266 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 HINT1P49773 126 aaPredicted RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ZCCHC14Q8WYQ9 949 aaKnown RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 CORO2AQ92828 525 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 APH1AQ96BI3 265 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
LSM3-201ENST00000306024 COL5A1P20908 1838 aaPredicted RBP9.38□□□□□ -0.91
LSM3-201ENST00000306024 ADAM20O43506 726 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 DBHP09172 617 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 CCNOP22674 350 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 BRS3P32247 399 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 TMEM50BP56557 158 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 TMEM267Q0VDI3 215 aaPredicted RBP9.37□□□□□ -0.91
LSM3-201ENST00000306024 IL24Q13007 206 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 NUFIP2Q7Z417 695 aaKnown RBP9.37□□□□□ -0.91
LSM3-201ENST00000306024 TRIB1Q96RU8 372 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 AURKAIP1Q9NWT8 199 aaPredicted RBP9.37□□□□□ -0.91
LSM3-201ENST00000306024 ANXA10Q9UJ72 324 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 FRYLO94915 3013 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 IGLV3-32A0A0A0MS00 114 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 MDFIC2A0A1B0GVS7 189 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 OR6C6A6NF89 314 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 TTRP02766 147 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 SERPINE2P07093 398 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 MTCP1P56278 107 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 H1FOOQ8IZA3 346 aaPredicted RBP9.37□□□□□ -0.91
LSM3-201ENST00000306024 OR5AU1Q8NGC0 362 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 STARD4Q96DR4 205 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 BOD1Q96IK1 185 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 SLC22A20A6NK97 555 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 KISS1Q15726 138 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 OR11L1Q8NGX0 322 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 TMEM170AQ8WVE7 144 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 RSG1Q9BU20 258 aa9.37□□□□□ -0.91
LSM3-201ENST00000306024 ZNF703Q9H7S9 590 aaPredicted RBP9.37□□□□□ -0.91
LSM3-201ENST00000306024 A0A1W2PR80 420 aa9.36□□□□□ -0.91
LSM3-201ENST00000306024 IGSF23A1L1A6 192 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms