RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TDRD6O60522 2096 aaKnown RBP12.08□□□□□ -0.48
PRKCB-201ENST00000303531 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 H0Y980 276 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 RSG1Q9BU20 258 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 B4E171 279 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 RAB29O14966 203 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 MELTFP08582 738 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
PRKCB-201ENST00000303531 TSPAN7P41732 249 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF660Q6AZW8 331 aaPredicted RBP12.08□□□□□ -0.48
PRKCB-201ENST00000303531 SLC25A47Q6Q0C1 308 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 THSD7AQ9UPZ6 1657 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 ANKRD31Q8N7Z5 1873 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 HBZP02008 142 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 SERF2P84101 59 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 MMDQ15546 238 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 TMEM222Q9H0R3 208 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 ATAD5Q96QE3 1844 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 OR10J1P30954 320 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 UCP2P55851 309 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 PMS2CLQ68D20 193 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 ISLRO14498 428 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 STARD4Q96DR4 205 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 GAPDHP04406 335 aaKnown RBP12.07□□□□□ -0.48
PRKCB-201ENST00000303531 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 DPF1Q92782 380 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 ABHD14BQ96IU4 210 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 TRBV5-7A0A0A0MS05 114 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF137PP52743 207 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 PRR7Q8TB68 274 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 AQP3Q92482 292 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
PRKCB-201ENST00000303531 SRP14P37108 136 aaKnown RBP12.06□□□□□ -0.48
PRKCB-201ENST00000303531 CCL8P80075 99 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 SLC35E4Q6ICL7 350 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 TMEM251Q8N6I4 163 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PPIAL4EA0A075B759 164 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PPIAL4DF5H284 164 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 SIGLEC5O15389 551 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 OR2H2O95918 312 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PPIAL4FP0DN26 164 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PPIAL4AQ9Y536 164 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 K7N7A8 449 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 C1QL1O75973 258 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 MDKP21741 143 aaPredicted RBP12.06□□□□□ -0.48
PRKCB-201ENST00000303531 P2RY4P51582 365 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 NSUN5P2Q63ZY6 315 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 ADIPOR1Q96A54 375 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 LHFPL6Q9Y693 200 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PIN1P1O15428 100 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 RHBDL1O75783 438 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 ACAA1P09110 424 aaPredicted RBP12.06□□□□□ -0.48
PRKCB-201ENST00000303531 SMDT1Q9H4I9 107 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 DGAT2L7PQ6IED9 249 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 TMSB15BA0A087X1C1 80 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 FAM209AQ5JX71 171 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 NPVFQ9HCQ7 196 aa12.06□□□□□ -0.48
PRKCB-201ENST00000303531 ZMAT5Q9UDW3 170 aaKnown RBP12.06□□□□□ -0.48
PRKCB-201ENST00000303531 SF3B6Q9Y3B4 125 aaKnown RBP12.06□□□□□ -0.48
PRKCB-201ENST00000303531 ADAM11O75078 769 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 MMP9P14780 707 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SNRNP40Q96DI7 357 aaKnown RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 PXMP4Q9Y6I8 212 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 MFSD2BA6NFX1 497 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 HIST1H1BP16401 226 aaKnown RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 ZNF441Q8N8Z8 693 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SGMS2Q8NHU3 365 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 VN1R17PQ8TDU5 208 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 FAM216AQ8WUB2 273 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 CCL13Q99616 98 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 IL19Q9UHD0 177 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 PAM16Q9Y3D7 125 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SNRNP200O75643 2136 aaKnown RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 CORTO00230 105 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SNAI3Q3KNW1 292 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 CFHR5Q9BXR6 569 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 COL11A2P13942 1736 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SCN2AQ99250 2005 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 MGST3O14880 152 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 CTSBP07858 339 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 CSRP3P50461 194 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 ECSCRQ19T08 205 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 RAB24Q969Q5 203 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 OPN3Q9H1Y3 402 aaPredicted RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 HTN1P15515 57 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 FHL5Q5TD97 284 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 HIGD1AQ9Y241 93 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 RBPMS2Q6ZRY4 209 aaKnown RBP12.05□□□□□ -0.48
PRKCB-201ENST00000303531 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
PRKCB-201ENST00000303531 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms