RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 SFTA2Q6UW10 78 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 MAVSQ7Z434 540 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 FUNDC1Q8IVP5 155 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 PARLQ9H300 379 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 CD1AP06126 327 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 NAT1P18440 290 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 RCC2Q9P258 522 aaKnown RBP12.47□□□□□ -0.41
HIPK3-201ENST00000303296 MRC1P22897 1456 aa12.47□□□□□ -0.41
HIPK3-201ENST00000303296 ZNHIT1O43257 154 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 CTAG2O75638 210 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 ATP5G2Q06055 141 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 Q6ZS52 159 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 CT55Q8WUE5 264 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 CCL19Q99731 98 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 RAB33BQ9H082 229 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 CA10Q9NS85 328 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 GAPDHP04406 335 aaKnown RBP12.46□□□□□ -0.41
HIPK3-201ENST00000303296 HBBP68871 147 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 MEF2CQ06413 473 aaPredicted RBP12.46□□□□□ -0.41
HIPK3-201ENST00000303296 YIPF6Q96EC8 236 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 MS4A5Q9H3V2 200 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 PGPA6NDG6 321 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 RPL32P62910 135 aaKnown RBP12.46□□□□□ -0.41
HIPK3-201ENST00000303296 SRSF5Q13243 272 aaKnown RBP12.46□□□□□ -0.41
HIPK3-201ENST00000303296 PTP4A1Q93096 173 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 ZNF714Q96N38 554 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 A1L4Q6 167 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 NDUFB6O95139 128 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 RHOVQ96L33 236 aa12.46□□□□□ -0.41
HIPK3-201ENST00000303296 FAM74A3Q4VXF1 159 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 C12orf54Q6X4T0 127 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 CACNA1SQ13698 1873 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 TMEM177Q53S58 311 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 TPRX1Q8N7U7 411 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 REPIN1Q9BWE0 567 aaKnown RBP12.46□□□□□ -0.42
HIPK3-201ENST00000303296 ZFP64Q9NPA5 681 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 CDC42EP3Q9UKI2 254 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 SLIT3O75094 1523 aa12.46□□□□□ -0.42
HIPK3-201ENST00000303296 LMO7DNF2Z398 122 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 NDUFA3O95167 84 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 IGHV3-48P01763 117 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 CKS1BP61024 79 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 TMEM106BQ9NUM4 274 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 COX19Q49B96 90 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 FOXB2Q5VYV0 432 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 TRBV20OR9-2A0A075B6H5 130 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 A0A1W2PQM1 296 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 ZNF707Q96C28 371 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-201ENST00000303296 ARHGEF28Q8N1W1 1705 aaKnown RBP12.45□□□□□ -0.42
HIPK3-201ENST00000303296 SOCS1O15524 211 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 MC5RP33032 325 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 CXorf66Q5JRM2 361 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-201ENST00000303296 RNF122Q9H9V4 155 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 SLC25A37Q9NYZ2 338 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 TRGV2A0A075B6R0 118 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 IGKV6-21A0A0C4DH24 114 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 IGHV5-51A0A0C4DH38 117 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 NKX2-6A6NCS4 301 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 K7N7A8 449 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 SNAI2O43623 268 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 ISG15P05161 165 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 PQLC2Q6ZP29 291 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 SYT11Q9BT88 431 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 AKIP1Q9NQ31 210 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 MTCL1Q9Y4B5 1905 aaKnown RBP12.45□□□□□ -0.42
HIPK3-201ENST00000303296 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 C16orf97H3BN30 126 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 PNLIPP16233 465 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 C19orf48Q6RUI8 117 aa12.45□□□□□ -0.42
HIPK3-201ENST00000303296 ADAD2Q8NCV1 583 aaKnown RBP12.45□□□□□ -0.42
HIPK3-201ENST00000303296 PPIAL4EA0A075B759 164 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 PPIAL4DF5H284 164 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 ZIC3O60481 467 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 PPIAL4FP0DN26 164 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 ZNF48Q96MX3 618 aaPredicted RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 PPIAL4AQ9Y536 164 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 PXMP4Q9Y6I8 212 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 YLPM1P49750 1951 aaKnown RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 ANKRD31Q8N7Z5 1873 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 P2RY1P47900 373 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 CCL13Q99616 98 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 SCNM1Q9BWG6 230 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 NDUFB4O95168 129 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 NAT2P11245 290 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 MUC1P15941 1255 aaPredicted RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 TSPOP30536 169 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 M0R381 172 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 ZNF415Q09FC8 603 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 CYB5R2Q6BCY4 276 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 ETHE1O95571 254 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 CFDP00746 253 aaPredicted RBP12.44□□□□□ -0.42
HIPK3-201ENST00000303296 PDLIM7Q9NR12 457 aa12.44□□□□□ -0.42
HIPK3-201ENST00000303296 FAM206AQ9NX38 181 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms