RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CCL27Q9Y4X3 112 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TRBV5-4A0A0C4DH59 114 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TMEM210A6NLX4 147 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 C16orf97H3BN30 126 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 K7N7A8 449 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 CCL21O00585 134 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 RECKO95980 971 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 MEF2CQ06413 473 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 CT55Q8WUE5 264 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 PGLYRP4Q96LB8 373 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 NPVFQ9HCQ7 196 aa9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TMEFF2Q9UIK5 374 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 TNRC6CQ9HCJ0 1690 aaKnown RBP9.08□□□□□ -0.96
CLIP1-201ENST00000302528 MAGEA5P43359 124 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 PRICKLE4Q2TBC4 344 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 FAM106AQ4KMX7 169 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 TMEM101Q96IK0 257 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 SF3B5Q9BWJ5 86 aaKnown RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 NPFFR1Q9GZQ6 430 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 S1PR2O95136 353 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 SSTR5P35346 364 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 RSPO2Q6UXX9 243 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 RTN4RL1Q86UN2 441 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 PGLYRP3Q96LB9 341 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 UQCR10Q9UDW1 63 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 PXMP4Q9Y6I8 212 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 IGHV1OR21-1A0A087WYE8 117 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 CA11O75493 328 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 CLDN14O95500 239 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 COX6B1P14854 86 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 TSPOP30536 169 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 DIRC2Q96SL1 478 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 MARVELD1Q9BSK0 173 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 NHSQ6T4R5 1651 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 hCG_38984A0A1B0GV85 526 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 GPX1P07203 203 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 UNQ5815/PRO19632Q6UWF5 114 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 TNFRSF12AQ9NP84 129 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 OR4C45A6NMZ5 311 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 LINC00869P0C866 280 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 ATP6V0CP27449 155 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 NXPH1P58417 271 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 LSM6P62312 80 aaKnown RBP9.07□□□□□ -0.96
CLIP1-201ENST00000302528 RHBDD2Q6NTF9 364 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 LHFPL5Q8TAF8 219 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 ZNF714Q96N38 554 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 LHX9Q9NQ69 397 aa9.07□□□□□ -0.96
CLIP1-201ENST00000302528 PGPA6NDG6 321 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 HPRT1P00492 218 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 PIGYQ3MUY2 71 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 C10orf128Q5T292 105 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 ST6GAL2Q96JF0 529 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 METTL1Q9UBP6 276 aaKnown RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 BTAF1O14981 1849 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 IGF2P01344 180 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 HLA-DRB1P01911 266 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 PF4P02776 101 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 PRR35P0CG20 571 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TNFSF10P50591 281 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 COL10A1Q03692 680 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TMEM95Q3KNT9 176 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 HIKESHIQ53FT3 197 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 LINC00596Q86U02 117 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 NEU1Q99519 415 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 OR2H1Q9GZK4 316 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 NDUFB4O95168 129 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 SOD3P08294 240 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 SEC11BP0C7V7 166 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 BCL2P10415 239 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 MBNL2Q5VZF2 373 aaKnown RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 MRM2Q9UI43 246 aaKnown RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TBL2Q9Y4P3 447 aaKnown RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 C1QTNF9BB2RNN3 333 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TNFSF14O43557 240 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 SLC25A17O43808 307 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 PITX3O75364 302 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 HLA-DQA1P01909 254 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 TRGC1P0CF51 173 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 HKR1P10072 659 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 OVCH2Q7RTZ1 564 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 H1FOOQ8IZA3 346 aaPredicted RBP9.06□□□□□ -0.96
CLIP1-201ENST00000302528 OR4D5Q8NGN0 318 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 ABHD1Q96SE0 405 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 FSCN3Q9NQT6 498 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 IL36RNQ9UBH0 155 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 COL4A1P02462 1669 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 IGHV3-72A0A0B4J1Y9 119 aa9.06□□□□□ -0.96
CLIP1-201ENST00000302528 GDF9O60383 454 aa9.05□□□□□ -0.96
CLIP1-201ENST00000302528 FOLR2P14207 255 aa9.05□□□□□ -0.96
CLIP1-201ENST00000302528 PNLIPP16233 465 aa9.05□□□□□ -0.96
CLIP1-201ENST00000302528 PSG9Q00887 426 aa9.05□□□□□ -0.96
CLIP1-201ENST00000302528 ZNF385CQ66K41 422 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms