RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 FAM90A10PA6NDY2 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A18PA6NE21 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A16PA6NEW6 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A20PA6NIJ5 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A8PA6NJQ4 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A7PA6NKC0 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A22PA8MWA6 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A12PA8MX19 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A5PA8MXJ8 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A23PA8MXZ1 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 PRR33A8MZF0 331 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 SOD3P08294 240 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A15PP0C7V4 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A13PP0C7W8 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A14PP0C7W9 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 FAM90A24PP0C7X0 464 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 SELLP14151 372 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 MAS1LP35410 378 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 ERVFRD-1P60508 538 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 UBE2KP61086 200 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 GAMTQ14353 236 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 DPPA2Q7Z7J5 298 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 GALNT14Q96FL9 552 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 SYT3Q9BQG1 590 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 J3QT63 122 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 CYB5BO43169 146 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 KALRNO60229 2985 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BKO60814 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BJP06899 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BOP23527 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BBP33778 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BDP58876 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BCP62807 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 ELOBQ15370 118 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST2H2BEQ16778 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.55■□□□□ 0.56
TPM4-201ENST00000300933 PLPPR1Q8TBJ4 325 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BHQ93079 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BNQ99877 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H2BMQ99879 126 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 OR1A1Q9P1Q5 309 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 STRAPQ9Y3F4 350 aaKnown RBP18.55■□□□□ 0.56
TPM4-201ENST00000300933 ATP23Q9Y6H3 246 aa18.55■□□□□ 0.56
TPM4-201ENST00000300933 TNFSF13O75888 250 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 NXPH2O95156 264 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 OR2H2O95918 312 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 CECR9P0C854 216 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 SSTP61278 116 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 OR8G1Q15617 311 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 DMRTC2Q8IXT2 367 aaPredicted RBP18.54■□□□□ 0.56
TPM4-201ENST00000300933 RBFOX3A6NFN3 312 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 TRGC2P03986 189 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 CEACAM1P13688 526 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 OMGP23515 440 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 STARD4Q96DR4 205 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 C18orf12Q96KH6 178 aa18.54■□□□□ 0.56
TPM4-201ENST00000300933 UBE2J1Q9Y385 318 aaPredicted RBP18.54■□□□□ 0.56
TPM4-201ENST00000300933 ZGRF1Q86YA3 2104 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 MLNRO43193 412 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 DLK1P80370 383 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 FAM53AQ6NSI3 398 aaPredicted RBP18.53■□□□□ 0.56
TPM4-201ENST00000300933 Q6P435 159 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 INO80CQ6PI98 192 aaPredicted RBP18.53■□□□□ 0.56
TPM4-201ENST00000300933 PCSK4Q6UW60 755 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 NKX2-6A6NCS4 301 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 PRAMEF6Q5VXH4 476 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 GTF3AQ92664 365 aaKnown RBP18.53■□□□□ 0.56
TPM4-201ENST00000300933 ERRFI1Q9UJM3 462 aaPredicted RBP18.53■□□□□ 0.56
TPM4-201ENST00000300933 PLCE1Q9P212 2302 aa18.53■□□□□ 0.56
TPM4-201ENST00000300933 K7N7A8 449 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 FABP4P15090 132 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 HIST1H1BP16401 226 aaKnown RBP18.52■□□□□ 0.56
TPM4-201ENST00000300933 LMO1P25800 156 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 RND3P61587 244 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 LGI3Q8N145 548 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 OR2G3Q8NGZ4 309 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 SUCNR1Q9BXA5 334 aa18.52■□□□□ 0.56
TPM4-201ENST00000300933 PPP1R2P9O14990 202 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 UCP3P55916 312 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 C4orf17Q53FE4 359 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 KHDC3LQ587J8 217 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 MAGT1Q9H0U3 335 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 PLSCR2Q9NRY7 297 aa18.52■□□□□ 0.55
TPM4-201ENST00000300933 RAC2P15153 192 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 LILRB2Q8N423 598 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 PKIBQ9C010 78 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 CEACAM4O75871 244 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 IGKV3-15P01624 115 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 NKX6-1P78426 367 aaPredicted RBP18.51■□□□□ 0.55
TPM4-201ENST00000300933 GPR157Q5UAW9 335 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 CCDC71LQ8N9Z2 235 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 LFNGQ8NES3 379 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 OR51H1Q8NH63 302 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 PLK3Q9H4B4 646 aa18.51■□□□□ 0.55
TPM4-201ENST00000300933 KIR2DS1A0A191URI9 304 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 LRP5LA4QPB2 252 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 FAM24AA6NFZ4 105 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 SEC14L6B5MCN3 397 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 PROB1E7EW31 1015 aa18.5■□□□□ 0.55
TPM4-201ENST00000300933 NDUFB7P17568 137 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms