RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 MSMO1Q15800 293 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 IAH1Q2TAA2 248 aaPredicted RBP13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 LRRC10Q5BKY1 277 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 C11orf71Q6IPW1 123 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 DTX2Q86UW9 622 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 ZNF695Q8IW36 515 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 CORO2AQ92828 525 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM56Q96MV1 263 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 OR2D2Q9H210 308 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 KAAG1Q9UBP8 84 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 TMED3Q9Y3Q3 217 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM56-RWDD3S4R434 201 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 CFAP46Q8IYW2 2715 aa13.04□□□□□ -0.32
HERPUD1-201ENST00000300302 EPG5Q9HCE0 2579 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 ZNF729A6NN14 1252 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 TNFRSF13BO14836 293 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 YPEL1O60688 119 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 MPC2O95563 127 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 DANCRP0C864 163 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 RNF224P0DH78 156 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 PET100P0DJ07 73 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 CGB3P0DN86 165 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 CGB7P0DN87 165 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 IGHV3-43DP0DP04 118 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 UCP1P25874 307 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 MEF2CQ06413 473 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 LTC4SQ16873 150 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM30BQ3MIR4 351 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM268Q5VZI3 342 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 TMEM65Q6PI78 240 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 LYZL2Q7Z4W2 148 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 ZNF546Q86UE3 836 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 DRAM1Q8N682 238 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 NEU4Q8WWR8 484 aaPredicted RBP13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 YPEL2Q96QA6 119 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 LIN7CQ9NUP9 197 aaKnown RBP13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 GSKIPQ9P0R6 139 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 LPAR3Q9UBY5 353 aa13.03□□□□□ -0.32
HERPUD1-201ENST00000300302 CDS2O95674 445 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 SOD3P08294 240 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 COL8A2P25067 703 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 SLC35G3Q8N808 338 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 OR51H1Q8NH63 302 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 IL22RA2Q969J5 263 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 GPHA2Q96T91 129 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 LINC00312Q9Y6C7 94 aa13.02□□□□□ -0.32
HERPUD1-201ENST00000300302 A6NNC1 897 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 TSC22D2O75157 780 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 GOSR1O95249 250 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 SERPINE2P07093 398 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 RPA2P15927 270 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 MRPS11P82912 194 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 C17orf58Q2M2W7 97 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 MORN2Q502X0 79 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 LHFPL5Q8TAF8 219 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 PLEKHF2Q9H8W4 249 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 TAS2R3Q9NYW6 316 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 RNF150Q9ULK6 438 aa13.02□□□□□ -0.33
HERPUD1-201ENST00000300302 CXCL2P19875 107 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 SSTR2P30874 369 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 LOXL3P58215 753 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 RPL31P62899 125 aaKnown RBP13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 GAL3ST2Q9H3Q3 398 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 LINC00574Q9H8X3 128 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 LAMP3Q9UQV4 416 aa13.01□□□□□ -0.33
HERPUD1-201ENST00000300302 OMGP23515 440 aa13□□□□□ -0.33
HERPUD1-201ENST00000300302 FAM53AQ6NSI3 398 aaPredicted RBP13□□□□□ -0.33
HERPUD1-201ENST00000300302 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
HERPUD1-201ENST00000300302 SELENOHQ8IZQ5 122 aaKnown RBP13□□□□□ -0.33
HERPUD1-201ENST00000300302 UBTD1Q9HAC8 227 aa13□□□□□ -0.33
HERPUD1-201ENST00000300302 PSG11Q9UQ72 335 aa13□□□□□ -0.33
HERPUD1-201ENST00000300302 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
HERPUD1-201ENST00000300302 SPTBN1Q01082 2364 aaKnown RBP13□□□□□ -0.33
HERPUD1-201ENST00000300302 LYNX1G3V0Z9 82 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 DVL1O14640 695 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 ITGB1BP1O14713 200 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 RP2O75695 350 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 LYNX1P0DP58 116 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 S100A11P31949 105 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 CATR1Q13166 79 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 IL15RAQ13261 267 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 ESCO2Q56NI9 601 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 INO80EQ8NBZ0 244 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 H1FXQ92522 213 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 TIMD4Q96H15 378 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 SPIN2AQ99865 258 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 SPIN2BQ9BPZ2 258 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 AGMATQ9BSE5 352 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 GFOD1Q9NXC2 390 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 IDI2-AS1Q9NZ38 188 aa12.99□□□□□ -0.33
HERPUD1-201ENST00000300302 MBD2Q9UBB5 411 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms