RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 AKAP14Q86UN6 197 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 KIR3DL3Q8N743 410 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 OR4F5Q8NH21 305 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 CCDC107Q8WV48 283 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 COQ2Q96H96 371 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 CABLES2Q9BTV7 478 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 SLC23A1Q9UHI7 598 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 DSCAML1Q8TD84 2053 aa17.25■□□□□ 0.35
SMCO4-201ENST00000298966 TNFRSF13BO14836 293 aaPredicted RBP17.24■□□□□ 0.35
SMCO4-201ENST00000298966 TIMM23O14925 209 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 GYPAP02724 150 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 GSTT2P0CG29 244 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 GZMHP20718 246 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 P2RX3P56373 397 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 TMEM155Q4W5P6 130 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 FAM201AQ5SY85 155 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 GLDNQ6ZMI3 551 aaPredicted RBP17.24■□□□□ 0.35
SMCO4-201ENST00000298966 C9orf139Q6ZV77 190 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 MRGPRFQ96AM1 343 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 OR51J1Q9H342 316 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 GPN1Q9HCN4 374 aaPredicted RBP17.24■□□□□ 0.35
SMCO4-201ENST00000298966 KIF25Q9UIL4 384 aa17.24■□□□□ 0.35
SMCO4-201ENST00000298966 IGHV3OR16-10A0A075B7F0 116 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 MEIKINA0A087WXM9 373 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 SNRPGP15A8MWD9 76 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 A8MXK9 166 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 RLN1P04808 185 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 CRYBA1P05813 215 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 IGHV4-38-2P0DP08 117 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 RRAS2P62070 204 aaPredicted RBP17.23■□□□□ 0.35
SMCO4-201ENST00000298966 AESQ08117 197 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 TMEM30BQ3MIR4 351 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 ZNF565Q8N9K5 539 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 TMEM185AQ8NFB2 350 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 DCAF16Q9NXF7 216 aa17.23■□□□□ 0.35
SMCO4-201ENST00000298966 ODAMA1E959 279 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 GPR37O15354 613 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 NDUFB3O43676 98 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 ANXA7P20073 488 aaKnown RBP17.22■□□□□ 0.35
SMCO4-201ENST00000298966 TAS2R31P59538 309 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 UBE2MP61081 183 aaKnown RBP17.22■□□□□ 0.35
SMCO4-201ENST00000298966 MEF2CQ06413 473 aaPredicted RBP17.22■□□□□ 0.35
SMCO4-201ENST00000298966 ESCO2Q56NI9 601 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 LRRC10Q5BKY1 277 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 ZNF660Q6AZW8 331 aaPredicted RBP17.22■□□□□ 0.35
SMCO4-201ENST00000298966 ZNRF1Q8ND25 227 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 CCL13Q99616 98 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 CITED1Q99966 193 aa17.22■□□□□ 0.35
SMCO4-201ENST00000298966 FAM181BA6NEQ2 426 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 HOXA3O43365 443 aaPredicted RBP17.21■□□□□ 0.35
SMCO4-201ENST00000298966 RCC1P18754 421 aaPredicted RBP17.21■□□□□ 0.35
SMCO4-201ENST00000298966 UCP3P55916 312 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 HOXA4Q00056 320 aaPredicted RBP17.21■□□□□ 0.35
SMCO4-201ENST00000298966 PAX8Q06710 450 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 CD276Q5ZPR3 534 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 LPCAT3Q6P1A2 487 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 ZDHHC16Q969W1 377 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 GALMQ96C23 342 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 TMEM246Q9BRR3 403 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 TAF9BQ9HBM6 251 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 VSIG4Q9Y279 399 aa17.21■□□□□ 0.35
SMCO4-201ENST00000298966 SOX21Q9Y651 276 aaPredicted RBP17.21■□□□□ 0.35
SMCO4-201ENST00000298966 KIAA2026Q5HYC2 2103 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 TRBV6-7A0A0A0MS04 114 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 SDCBPO00560 298 aaPredicted RBP17.2■□□□□ 0.34
SMCO4-201ENST00000298966 SPINT2O43291 252 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 ADAM20O43506 726 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 SCTP09683 121 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 PPIAL4GP0DN37 164 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 VSIG10L2P0DP72 767 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 HERV-K104P61576 105 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 C11orf91Q3C1V1 193 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 AADACL3Q5VUY0 350 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 SLC25A42Q86VD7 318 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 OR10J5Q8NHC4 309 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 ZFAND1Q8TCF1 268 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 CORO2AQ92828 525 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF2Q9BSG1 426 aaPredicted RBP17.2■□□□□ 0.34
SMCO4-201ENST00000298966 TOLLIPQ9H0E2 274 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 MED28Q9H204 178 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 SLC25A10Q9UBX3 287 aaPredicted RBP17.2■□□□□ 0.34
SMCO4-201ENST00000298966 MIOXQ9UGB7 285 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 DOCK11Q5JSL3 2073 aa17.2■□□□□ 0.34
SMCO4-201ENST00000298966 TRGV10A0A0A0MS01 117 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 TRAV40A0A0B4J280 105 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 MDFIC2A0A1B0GVS7 189 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 hADV38S2A0JD32 116 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 F5H0A9 414 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-201ENST00000298966 CREBL2O60519 120 aaPredicted RBP17.19■□□□□ 0.34
SMCO4-201ENST00000298966 CCNKO75909 580 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF205O95201 554 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 FCGR2CP31995 323 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 GLIPR1P48060 266 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 CBX3Q13185 183 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 EDDM3AQ14507 147 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 ZNF626Q68DY1 528 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 C11orf88Q6PI97 169 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 BTNL3Q6UXE8 466 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 NLRC3Q7RTR2 1065 aa17.19■□□□□ 0.34
SMCO4-201ENST00000298966 FAM216BQ8N7L0 139 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms