RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CCL3P10147 92 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 COX5AP20674 150 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 KITLGP21583 273 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF816Q0VGE8 651 aaPredicted RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 HIST3H3Q16695 136 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 RHBDD2Q6NTF9 364 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 RPP25LQ8N5L8 163 aaKnown RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 ANAPC16Q96DE5 110 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 HS3ST6Q96QI5 342 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 WDR61Q9GZS3 305 aaKnown RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 OR6C3Q9NZP0 311 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 OR2W1Q9Y3N9 320 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 LTBP2Q14767 1821 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 PGPEP1LA6NFU8 196 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TCF21O43680 179 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 MPLP40238 635 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 PCBD1P61457 104 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 ZNF90Q03938 601 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TCF23Q7RTU1 214 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 NFAM1Q8NET5 270 aaPredicted RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM208Q9BTX3 173 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TRAV34A0A0B4J273 112 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 B4E171 279 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 SPINK4O60575 86 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 NPSP0C0P6 89 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TSPAN7P41732 249 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TFPI2P48307 235 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TGFBR3Q03167 851 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 TGIF2LYQ8IUE0 185 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 ODF3L1Q8IXM7 274 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 CPAMD8Q8IZJ3 1885 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 OR10P1Q8NGE3 313 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 MBD3L1Q8WWY6 194 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 CDCA3Q99618 268 aaPredicted RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 AKIRIN1Q9H9L7 192 aaPredicted RBP9.75□□□□□ -0.85
TRUB1-201ENST00000298746 SEMA5BQ9P283 1151 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 ICE1Q9Y2F5 2266 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 EML6Q6ZMW3 1958 aa9.75□□□□□ -0.85
TRUB1-201ENST00000298746 SIRPB1O00241 398 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
TRUB1-201ENST00000298746 SYNGR3O43761 229 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 FKBP2P26885 142 aaKnown RBP9.74□□□□□ -0.85
TRUB1-201ENST00000298746 ZFP36L1Q07352 338 aaKnown RBP9.74□□□□□ -0.85
TRUB1-201ENST00000298746 LRRC75BQ2VPJ9 315 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 CISD2Q8N5K1 135 aaKnown RBP9.74□□□□□ -0.85
TRUB1-201ENST00000298746 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 HSPB9Q9BQS6 159 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 PRRG4Q9BZD6 226 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 MANBALQ9NQG1 85 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM38BQ9NVV0 291 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 OR1A1Q9P1Q5 309 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 CLN8Q9UBY8 286 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 TCFL5Q9UL49 500 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 RNF115Q9Y4L5 304 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 ATP23Q9Y6H3 246 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 NDUFB4O95168 129 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 OTX1P32242 354 aaPredicted RBP9.74□□□□□ -0.85
TRUB1-201ENST00000298746 TDGF1P3P51864 188 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 TXN2Q99757 166 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 OR2H1Q9GZK4 316 aa9.74□□□□□ -0.85
TRUB1-201ENST00000298746 PIGBOS1A0A0B4J2F0 54 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 DEGS1O15121 323 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 SYNGR1O43759 233 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 PIAS2O75928 621 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IGLV3-1P01715 115 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 GLB1P16278 677 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IL3RAP26951 378 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 PTGDSP41222 190 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 THBS3P49746 956 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 EDDM3BP56851 147 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 Q6ZPA2 131 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 FGFBP3Q8TAT2 258 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 DTD1Q8TEA8 209 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM54Q969K7 222 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IMMP2LQ96T52 175 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 PSMG3Q9BT73 122 aaPredicted RBP9.73□□□□□ -0.85
TRUB1-201ENST00000298746 POLR3KQ9Y2Y1 108 aaPredicted RBP9.73□□□□□ -0.85
TRUB1-201ENST00000298746 A0A1B0GWJ7 208 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IL18BPO95998 194 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IRF2P14316 349 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 GCH1P30793 250 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 TPPP2P59282 170 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 ARSJQ5FYB0 599 aaPredicted RBP9.73□□□□□ -0.85
TRUB1-201ENST00000298746 SLC25A53Q5H9E4 307 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 NUFIP2Q7Z417 695 aaKnown RBP9.73□□□□□ -0.85
TRUB1-201ENST00000298746 GBGT1Q8N5D6 347 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 TMEM9BQ9NQ34 198 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 IGHV1OR15-9A0A0B4J2B8 117 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 GJE1A6NN92 205 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 F6UZH7 168 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 DLEU1O43261 78 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 TNFSF10P50591 281 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 RABEPKQ7Z6M1 372 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 PLPPR1Q8TBJ4 325 aa9.73□□□□□ -0.85
TRUB1-201ENST00000298746 SRXN1Q9BYN0 137 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms