RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 OOEPA6NGQ2 149 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 C17orf100A8MU93 164 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 PHF1O43189 567 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-202ENST00000297979 HSPA12AO43301 675 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 ZNF737O75373 536 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 MPC2O95563 127 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 CD55P08174 381 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 FBP1P09467 338 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 PSMB6P28072 239 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 LRTM2Q8N967 370 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 THAP6Q8TBB0 222 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 MFFQ9GZY8 342 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 CCL28Q9NRJ3 127 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-202ENST00000297979 C3orf85A0A1B0GTC6 90 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.93□□□□□ -0.5
C9orf3-202ENST00000297979 HSD17B6O14756 317 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 IFNA21P01568 189 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 CD3EP07766 207 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 GRNP28799 593 aaKnown RBP11.93□□□□□ -0.5
C9orf3-202ENST00000297979 S100A11P31949 105 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 TBC1D26Q86UD7 250 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 PPP1R35Q8TAP8 253 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 UBALD1Q8TB05 177 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 DNTTIP1Q9H147 329 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 NIT2Q9NQR4 276 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 MLXQ9UH92 298 aa11.93□□□□□ -0.5
C9orf3-202ENST00000297979 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 LY86O95711 162 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 CD80P33681 288 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 GLIPR1P48060 266 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TLE1Q04724 770 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TEX261Q6UWH6 196 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TMUB2Q71RG4 321 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 CMTM1Q8IZ96 169 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 LGI3Q8N145 548 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 GLYATL2Q8WU03 294 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 FAM222BQ8WU58 562 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 MSI2Q96DH6 328 aaKnown RBP11.92□□□□□ -0.5
C9orf3-202ENST00000297979 SNX22Q96L94 193 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 U3KQ87 197 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 E7EQL1 145 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 CCL8P80075 99 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TESK1Q15569 626 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 GALMQ96C23 342 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 ARL6Q9H0F7 186 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 ATRXP46100 2492 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 SPDEFO95238 335 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 HEXAP06865 529 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 IRF2P14316 349 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 LUMP51884 338 aaPredicted RBP11.92□□□□□ -0.5
C9orf3-202ENST00000297979 SRPXP78539 464 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 CDSNQ15517 529 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 SLC16A13Q7RTY0 426 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 TPRX1Q8N7U7 411 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 OR1L1Q8NH94 360 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 MRGPRDQ8TDS7 321 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 C18orf12Q96KH6 178 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 KCNJ16Q9NPI9 418 aa11.92□□□□□ -0.5
C9orf3-202ENST00000297979 MGST3O14880 152 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 CYB5R3P00387 301 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-202ENST00000297979 S100GP29377 79 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 IL2RGP31785 369 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 EDDM3AQ14507 147 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 IAH1Q2TAA2 248 aaPredicted RBP11.91□□□□□ -0.5
C9orf3-202ENST00000297979 FAM201AQ5SY85 155 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 NEUROG1Q92886 237 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 HBZP02008 142 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 CEACAM6P40199 344 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 SWI5Q1ZZU3 235 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 BVESQ8NE79 360 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 OR13A1Q8NGR1 328 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 TMEM222Q9H0R3 208 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 GSKIPQ9P0R6 139 aa11.91□□□□□ -0.5
C9orf3-202ENST00000297979 PLA2G5P39877 138 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 IL15RAQ13261 267 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 ZNF345Q14585 488 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 SMCO1Q147U7 214 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 PFDN5Q99471 154 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 EGLN1Q9GZT9 426 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 UBE2J1Q9Y385 318 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-202ENST00000297979 A0A0D9SG52 128 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 K7N7A8 449 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 PGLYRP1O75594 196 aaPredicted RBP11.9□□□□□ -0.5
C9orf3-202ENST00000297979 RP2O75695 350 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 BEX5Q5H9J7 111 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 C9orf152Q5JTZ5 239 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 STUMQ69YW2 141 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
C9orf3-202ENST00000297979 ZCCHC24Q8N2G6 241 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms