RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
HPS3-201ENST00000296051 FANCMQ8IYD8 2048 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 GATCO43716 136 aaKnown RBP11.63□□□□□ -0.55
HPS3-201ENST00000296051 GAPDHP04406 335 aaKnown RBP11.63□□□□□ -0.55
HPS3-201ENST00000296051 ZNF883P0CG24 379 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 DTYMKP23919 212 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 VAMP3Q15836 100 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
HPS3-201ENST00000296051 VPS25Q9BRG1 176 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 STARD10Q9Y365 291 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 LYPD3O95274 346 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 MST1P26927 711 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 Q8IYB0 196 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 DPF1Q92782 380 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 ZNF488Q96MN9 340 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 TIMP4Q99727 224 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 ATP5SQ99766 215 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 LHFPL6Q9Y693 200 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 DDTP30046 118 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 PKIAP61925 76 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 SSX7Q7RTT5 188 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 KLHDC3Q9BQ90 382 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 GPR35Q9HC97 309 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 RALGAPA2Q2PPJ7 1873 aa11.63□□□□□ -0.55
HPS3-201ENST00000296051 AHRRA9YTQ3 701 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 FCGR3AP08637 254 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 TRGC1P0CF51 173 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 ACP1P24666 158 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 TMEM50BP56557 158 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
HPS3-201ENST00000296051 LY6DQ14210 128 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 MOB3AQ96BX8 217 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 PCGF1Q9BSM1 259 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 LRP5LA4QPB2 252 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 TCL1AP56279 114 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 POC1AQ8NBT0 407 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 ELOVL1Q9BW60 279 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 FAM206AQ9NX38 181 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 M0R143 59 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 PAGE4O60829 102 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 CSRP1P21291 193 aaKnown RBP11.62□□□□□ -0.55
HPS3-201ENST00000296051 F2RP25116 425 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 IL24Q13007 206 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 BIVMQ86UB2 503 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 SLC25A40Q8TBP6 338 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 CHST5Q9GZS9 411 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 CISD1Q9NZ45 108 aaKnown RBP11.62□□□□□ -0.55
HPS3-201ENST00000296051 NAT8BQ9UHF3 227 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 OTOGLQ3ZCN5 2332 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 HEATR5AQ86XA9 2040 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 K7ESF4 209 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 FAM3BP58499 235 aaPredicted RBP11.62□□□□□ -0.55
HPS3-201ENST00000296051 TIGITQ495A1 244 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 TEX30Q5JUR7 227 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 RTN4RL2Q86UN3 420 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 MRGPRDQ8TDS7 321 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 SIP14410 1827 aa11.62□□□□□ -0.55
HPS3-201ENST00000296051 ELOA3CA0A087WX78 387 aaPredicted RBP11.61□□□□□ -0.55
HPS3-201ENST00000296051 CDX1P47902 265 aaPredicted RBP11.61□□□□□ -0.55
HPS3-201ENST00000296051 ZNF600Q6ZNG1 722 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 OR8B3Q8NGG8 313 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 OR8B2Q96RD0 313 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 PSG11Q9UQ72 335 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 TMEM14DPA8MWL7 114 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 FCN1O00602 326 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 RAMP1O60894 148 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 SPNS3Q6ZMD2 512 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 MDP1Q86V88 176 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 DMRTA2Q96SC8 542 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 PTPRDP23468 1912 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 GBF1Q92538 1859 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 COL19A1Q14993 1142 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 ACSM6Q6P461 480 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 ZNF519Q8TB69 540 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 ABHD14AQ9BUJ0 271 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 RTN4RQ9BZR6 473 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 FKBP11Q9NYL4 201 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 PITPNC1Q9UKF7 332 aa11.61□□□□□ -0.55
HPS3-201ENST00000296051 A0A1B0GTI1 187 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 PSG2P11465 335 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 ATP5J2P56134 94 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 TIPARPQ7Z3E1 657 aaKnown RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 METTL1Q9UBP6 276 aaKnown RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 SCTP09683 121 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 PNRC1Q12796 327 aaPredicted RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 ETFRF1Q6IPR1 90 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 ATG101Q9BSB4 218 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 OR2J1Q9GZK6 312 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 CBY1Q9Y3M2 126 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 MTCL1Q9Y4B5 1905 aaKnown RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 SH2D7A6NKC9 451 aaPredicted RBP11.6□□□□□ -0.55
HPS3-201ENST00000296051 HSBP1O75506 76 aa11.6□□□□□ -0.55
HPS3-201ENST00000296051 CDS2O95674 445 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms