RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 C4orf46Q504U0 113 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 IGSF11Q5DX21 431 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 C11orf42Q8N5U0 333 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 IL1F10Q8WWZ1 152 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 KIRREL1Q96J84 757 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 ZNF714Q96N38 554 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 TINAGL1Q9GZM7 467 aaPredicted RBP12.45□□□□□ -0.42
CCDC140-201ENST00000295226 NCOR1P1Q9H4R4 102 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 KCNIP1Q9NZI2 227 aa12.45□□□□□ -0.42
CCDC140-201ENST00000295226 UBE2J1Q9Y385 318 aaPredicted RBP12.45□□□□□ -0.42
CCDC140-201ENST00000295226 IGHV3-43A0A0B4J1X8 118 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 IGKV1-6A0A0C4DH72 117 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 KIR2DS1A0A191URI9 304 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 KBTBD11-OT1A0A1B0GTJ5 212 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 ENSAO43768 121 aaKnown RBP12.44□□□□□ -0.42
CCDC140-201ENST00000295226 TGFAP01135 160 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 IFNA6P05013 189 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 LIPFP07098 398 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 IGHV3-43DP0DP04 118 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 GZMHP20718 246 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 HLA-DRB3P79483 266 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 VAX1Q5SQQ9 334 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 ARRDC1Q8N5I2 433 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 LINC01356Q8N9X3 169 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 OR2AK2Q8NG84 335 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 C1orf159Q96HA4 380 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 SCGB3A2Q96PL1 93 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 ZNF286AQ9HBT8 521 aa12.44□□□□□ -0.42
CCDC140-201ENST00000295226 M0QYG6 137 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 PMP2P02689 132 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 OR4E1P0C645 316 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 HERPUD1Q15011 391 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 HMGN3Q15651 99 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 C6orf183Q5T699 404 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 Q8N7P7 452 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 OR52L2PQ8NGH6 319 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 LEAP2Q969E1 77 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 PIPOXQ9P0Z9 390 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 LPAR3Q9UBY5 353 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
CCDC140-201ENST00000295226 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
CCDC140-201ENST00000295226 ZNF729A6NN14 1252 aaPredicted RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SDCBPO00560 298 aaPredicted RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 BET1O15155 118 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 NFYBP25208 207 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 DVL1P1P54792 670 aaPredicted RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TAS2R31P59538 309 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 UBE2MP61081 183 aaKnown RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 GNMTQ14749 295 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 MOB1BQ7L9L4 216 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 OR11H4Q8NGC9 324 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TMEM186Q96B77 213 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SLC6A7Q99884 636 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SIRT7Q9NRC8 400 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TAS2R3Q9NYW6 316 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 OR1A1Q9P1Q5 309 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 INSIG2Q9Y5U4 225 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 HMSDA8MTL9 139 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 NPIPB11E5RHQ5 1161 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SPINT2O43291 252 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 ZNF16P17020 682 aaPredicted RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 HRH1P35367 487 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TAS2R46P59540 309 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 CHRFAM7AQ494W8 412 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SCGB2B2Q4G0G5 96 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SLC25A42Q86VD7 318 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 TMEM17Q86X19 198 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 C12orf45Q8N5I9 185 aaPredicted RBP12.42□□□□□ -0.42
CCDC140-201ENST00000295226 UXS1Q8NBZ7 420 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 OR13C8Q8NGS7 320 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 PCGF1Q9BSM1 259 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 SLC23A1Q9UHI7 598 aa12.42□□□□□ -0.42
CCDC140-201ENST00000295226 C17orf98A8MV24 154 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 ARPC4P59998 168 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 TSPAN5P62079 268 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC140-201ENST00000295226 DCAF12L2Q5VW00 463 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 BTNL3Q6UXE8 466 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 Q6ZS49 121 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 PDZD9Q8IXQ8 264 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 GALMQ96C23 342 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 SMR3AQ99954 134 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 PARP12Q9H0J9 701 aaKnown RBP12.41□□□□□ -0.42
CCDC140-201ENST00000295226 IDI2-AS1Q9NZ38 188 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 OPN4Q9UHM6 478 aa12.41□□□□□ -0.42
CCDC140-201ENST00000295226 IGHV1-8P0DP01 117 aa12.4□□□□□ -0.42
CCDC140-201ENST00000295226 PPP1CCP36873 323 aaKnown RBP12.4□□□□□ -0.42
CCDC140-201ENST00000295226 KIR2DS4P43632 304 aa12.4□□□□□ -0.42
CCDC140-201ENST00000295226 LOXL3P58215 753 aa12.4□□□□□ -0.42
CCDC140-201ENST00000295226 PAX8Q06710 450 aa12.4□□□□□ -0.42
CCDC140-201ENST00000295226 FGL1Q08830 312 aa12.4□□□□□ -0.42
CCDC140-201ENST00000295226 KLRD1Q13241 179 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms