RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 VAX2Q9UIW0 290 aa13.05□□□□□ -0.32
LRRTM1-201ENST00000295057 IGKV1-12A0A0C4DH73 117 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 A0A0U1RQV5 110 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 IGKV1D-12P01611 117 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 OPN1MWP04001 364 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 OPN1MW2P0DN77 364 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 OPN1MW3P0DN78 364 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 B4GALT1P15291 398 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 GZMHP20718 246 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 MEOX1P50221 254 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 LHX2P50458 406 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 TAS2R30P59541 319 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ERVS71-1P61550 626 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 PNRC1Q12796 327 aaPredicted RBP13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF726P1Q15940 193 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 DMRTA1Q5VZB9 504 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF774Q6NX45 483 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 SLC25A26Q70HW3 274 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 AAED1Q7RTV5 226 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 FER1L6-AS2Q96M78 137 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 WFIKKN1Q96NZ8 548 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ABI3Q9P2A4 366 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 SP1P08047 785 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 CEACAM1P13688 526 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 GUCA1AP43080 201 aaPredicted RBP13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 FAM180AQ6UWF9 173 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF573Q86YE8 665 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ATP5SQ99766 215 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF286AQ9HBT8 521 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 LAMP3Q9UQV4 416 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 KIAA1549Q9HCM3 1950 aa13.04□□□□□ -0.32
LRRTM1-201ENST00000295057 CTSSP25774 331 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 PAX9P55771 341 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 PMP22Q01453 160 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 TMEM267Q0VDI3 215 aaPredicted RBP13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 ARSJQ5FYB0 599 aaPredicted RBP13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 RNFT1Q5M7Z0 435 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 C9orf135Q5VTT2 229 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 DEFB127Q9H1M4 99 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 SRD5A3Q9H8P0 318 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 SLC7A10Q9NS82 523 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 M0R135 149 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 CCL11P51671 97 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 UCP3P55916 312 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 CLDN18P56856 261 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 RPP30P78346 268 aaKnown RBP13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 ADIRFQ15847 76 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 C1orf194Q5T5A4 169 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 C16orf82Q7Z2V1 217 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 FGFBP3Q8TAT2 258 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF799Q96GE5 643 aa13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 SF3B5Q9BWJ5 86 aaKnown RBP13.03□□□□□ -0.32
LRRTM1-201ENST00000295057 FREM1Q5H8C1 2179 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 WISP2O76076 250 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 CST2P09228 141 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 NCR3LG1Q68D85 454 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 SLC25A24Q6NUK1 477 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 ZNF818PQ6ZRF7 136 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 FAM185AQ8N0U4 392 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 MDS2Q8NDY4 140 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 TMEM56Q96MV1 263 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 ELOVL1Q9BW60 279 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 PLEK2Q9NYT0 353 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 TMEM56-RWDD3S4R434 201 aa13.02□□□□□ -0.32
LRRTM1-201ENST00000295057 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 ID3Q02535 119 aa13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 PMS2P11Q13670 270 aa13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 MRPL41Q8IXM3 137 aaKnown RBP13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 B4GALT7Q9UBV7 327 aa13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 ST3GAL6Q9Y274 331 aa13.02□□□□□ -0.33
LRRTM1-201ENST00000295057 ATMQ13315 3056 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 KIR2DL5BA0A0G2JN68 375 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 KIR2DL5BA0A0G2JPC4 375 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 CEBPZOSA8MTT3 80 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 FOXG1P55316 489 aaPredicted RBP13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 ARG2P78540 354 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 RTP5Q14D33 572 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 CEACAM16Q2WEN9 425 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 NMSQ5H8A3 153 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 H1FOOQ8IZA3 346 aaPredicted RBP13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 KIR2DL5AQ8N109 375 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 GJC3Q8NFK1 279 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 TMEM18Q96B42 140 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 HIPK2Q9H2X6 1198 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 ZNF552Q9H707 407 aaPredicted RBP13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 TRAV1-1A0A0B4J248 108 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 GNB2P62879 340 aa13.01□□□□□ -0.33
LRRTM1-201ENST00000295057 BAXQ07812 192 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms