RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 HES7Q9BYE0 225 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1B0GV72 72 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1W2PRD5 423 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1W2PRF3 423 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1W2PRM7 423 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 K7ESF4 209 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
SH3RF1-201ENST00000284637 ZNHIT1O43257 154 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 CRYABP02511 175 aaKnown RBP14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 ZXDCQ2QGD7 858 aaPredicted RBP14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 RARRES2Q99969 163 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 SOSTQ9BQB4 213 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 RNF122Q9H9V4 155 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 TUBD1Q9UJT1 453 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 AGFG2O95081 481 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 SLC35B1P78383 322 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 MEF2BQ02080 365 aaPredicted RBP14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 GABRA6Q16445 453 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 TCFL5Q9UL49 500 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 DLEC1Q9Y238 1755 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 SNRPCP09234 159 aaKnown RBP14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 GZMHP20718 246 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 WDR25Q64LD2 544 aaPredicted RBP14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 MOGAT3Q86VF5 341 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 CT55Q8WUE5 264 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 NGFRP08138 427 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 UNQ9370/PRO34162Q6UXP9 181 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 OR5R1Q8NH85 324 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 ZNF665Q9H7R5 613 aa14.3□□□□□ -0.12
SH3RF1-201ENST00000284637 KLK10O43240 276 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 FOLR2P14207 255 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 UFC1Q9Y3C8 167 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 FOCADQ5VW36 1801 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 NDUFA2O43678 99 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 CXorf1O96002 111 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 MPLP40238 635 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 MTURNQ8N3F0 131 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 OR4X1Q8NH49 305 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 VSTM2AQ8TAG5 236 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 SPSB2Q99619 263 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 APELAP0DMC3 54 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 NPY1RP25929 384 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 BTCP35070 178 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 ZNF137PP52743 207 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 SOX8P57073 446 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 WDR74Q6RFH5 385 aaPredicted RBP14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 TMEM108Q6UXF1 575 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 LIFP15018 202 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 WNT5AP41221 380 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 TNFRSF9Q07011 255 aa14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 CXorf66Q5JRM2 361 aaPredicted RBP14.29□□□□□ -0.12
SH3RF1-201ENST00000284637 TEPPQ6URK8 271 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 GPHA2Q96T91 129 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 ADAMTSL1Q8N6G6 1762 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 C4orf51C9J302 202 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 M0QZ24 198 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 PPIHO43447 177 aaKnown RBP14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 WNT16Q9UBV4 365 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1W2PPE3 182 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 GOSR1O95249 250 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 APCSP02743 223 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 RPL7P18124 248 aaKnown RBP14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 WDFY1Q8IWB7 410 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 TPRX1Q8N7U7 411 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 SLC25A40Q8TBP6 338 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 A0A1W2PQF6 199 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 PRRX1P54821 245 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 ROM1Q03395 351 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 TMEM116Q8NCL8 245 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 SMIM8Q96KF7 97 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 FBLL1A6NHQ2 334 aaKnown RBP14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 TMEM140Q9NV12 185 aa14.28□□□□□ -0.12
SH3RF1-201ENST00000284637 MIA3Q5JRA6 1907 aa14.27□□□□□ -0.12
SH3RF1-201ENST00000284637 CD40P25942 277 aa14.27□□□□□ -0.12
SH3RF1-201ENST00000284637 GPX7Q96SL4 187 aaPredicted RBP14.27□□□□□ -0.12
SH3RF1-201ENST00000284637 HSPB8Q9UJY1 196 aa14.27□□□□□ -0.12
SH3RF1-201ENST00000284637 RNF222A6NCQ9 220 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 SMPD2O60906 423 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 HPRT1P00492 218 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 MELTFP08582 738 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 SCTP09683 121 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 REG4Q9BYZ8 158 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 THYN1Q9P016 225 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 TRBV5-7A0A0A0MS05 114 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 A0A0J9YW62 118 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 NDUFB4O95168 129 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 FDX2Q6P4F2 183 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 GALNT14Q96FL9 552 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 CLEC1BQ9P126 229 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 PILRAQ9UKJ1 303 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 ARFGEF1Q9Y6D6 1849 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 IGSF23A1L1A6 192 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 ERGP11308 486 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 ZP4Q12836 540 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 C1orf100Q5SVJ3 147 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 C10orf113Q5VZT2 155 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
SH3RF1-201ENST00000284637 SYNGR1O43759 233 aa14.26□□□□□ -0.13
SH3RF1-201ENST00000284637 C2orf68Q2NKX9 166 aa14.26□□□□□ -0.13
SH3RF1-201ENST00000284637 HARBI1Q96MB7 349 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms