RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 SERPINB5P36952 375 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 TAS2R43P59537 309 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ERVFC1-1P60608 527 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ERVK-16P61578 105 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 HIST1H3AP68431 136 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 H3F3AP84243 136 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 KRTAP1-1Q07627 177 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 SIX1Q15475 284 aaPredicted RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 CEACAM16Q2WEN9 425 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 FAM78BQ5VT40 261 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OR10K2Q6IF99 312 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 HIST2H3AQ71DI3 136 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 CBR4Q8N4T8 237 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 RAB42Q8N4Z0 105 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ZFP41Q8N8Y5 198 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OR2M7Q8NG81 312 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OR6N1Q8NGY5 312 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 LHFPL5Q8TAF8 219 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 AGAP11Q8TF27 550 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 TAMM41Q96BW9 452 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ZNF501Q96CX3 271 aaPredicted RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 PGLYRP4Q96LB8 373 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ARHGDIGQ99819 225 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 SULT4A1Q9BR01 284 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 GINS3Q9BRX5 216 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 KIFC1Q9BW19 673 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 WFDC1Q9HC57 220 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 ENY2Q9NPA8 101 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 DEPPQ9NTK1 212 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 CALYQ9NYX4 217 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 DOK5Q9P104 306 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OPTCQ9UBM4 332 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 POLR1DQ9Y2S0 133 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 CARHSP1Q9Y2V2 147 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 FAM32AQ9Y421 112 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 ASB4Q9Y574 426 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 PRSS21Q9Y6M0 314 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 GOLGA4Q13439 2230 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 MAP1BP46821 2468 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 ASPMQ8IZT6 3477 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 A0A0J9YY10 115 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 A0A1B0GV90 55 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR51F1A6NGY5 319 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 E7EQ34 232 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 ATP6V1G2-DDX39BF2Z307 99 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR1I1O60431 355 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 GALR3O60755 368 aaPredicted RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 STK16O75716 305 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 AIFM1O95831 613 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 P01737 135 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 ZSCAN5DPP0CG00 497 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 RCC1P18754 421 aaPredicted RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 RPS3P23396 243 aaKnown RBP eCLIP3.59□□□□□ -1.83
CD44-202ENST00000278385 OMGP23515 440 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 PSMB9P28065 219 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 MYCNOSP40205 109 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR1E2P47887 323 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 CCR6P51684 374 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 PPP1CAP62136 330 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 WHAMMP3Q1A5X7 153 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 LRRC36Q1X8D7 754 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 DEFB109BQ30KR1 87 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 PAGE3Q5JUK9 113 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 LAMTOR1Q6IAA8 161 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 CNIH2Q6PI25 160 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 C3orf62Q6ZUJ4 267 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 GRINAQ7Z429 371 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 PPP1R27Q86WC6 154 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 C1orf158Q8N1D5 194 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR8J3Q8NGG0 315 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR9A2Q8NGT5 310 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 OR13C6PQ8NH95 151 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 CD200R1Q8TD46 325 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 CT55Q8WUE5 264 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 NAT14Q8WUY8 206 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 BLNKQ8WV28 456 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 TMED6Q8WW62 240 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 MAGOHBQ96A72 148 aaKnown RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 LRRC58Q96CX6 371 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 FOPNLQ96NB1 174 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 ZNF285Q96NJ3 590 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 BIRC8Q96P09 236 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 PITX2Q99697 317 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 C2orf88Q9BSF0 95 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 FAAP24Q9BTP7 215 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 SRXN1Q9BYN0 137 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 SLC25A39Q9BZJ4 359 aaPredicted RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 RPF2Q9H7B2 306 aaKnown RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 RRAGDQ9NQL2 400 aaPredicted RBP3.59□□□□□ -1.83
CD44-202ENST00000278385 SPANXA1Q9NS26 97 aa3.59□□□□□ -1.83
CD44-202ENST00000278385 TAS2R5Q9NYW4 299 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms