RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 RAB32Q13637 225 aa18.33■□□□□ 0.53
CCDC7-201ENST00000277657 PRSS54Q6PEW0 395 aa18.33■□□□□ 0.53
CCDC7-201ENST00000277657 SELENOHQ8IZQ5 122 aaKnown RBP18.33■□□□□ 0.53
CCDC7-201ENST00000277657 FAM216BQ8N7L0 139 aa18.33■□□□□ 0.53
CCDC7-201ENST00000277657 CCL17Q92583 94 aa18.33■□□□□ 0.53
CCDC7-201ENST00000277657 PPIAL4AQ9Y536 164 aa18.33■□□□□ 0.53
CCDC7-201ENST00000277657 A0A0D9SG52 128 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 MEX3AA1L020 520 aaKnown RBP18.33■□□□□ 0.52
CCDC7-201ENST00000277657 ACOT7LQ6ZUV0 252 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 KCNRGQ8N5I3 272 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 DRAM1Q8N682 238 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 ZNF645Q8N7E2 425 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 IL22RA2Q969J5 263 aa18.33■□□□□ 0.52
CCDC7-201ENST00000277657 DUXBA0A1W2PPF3 345 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 F2RL2O00254 374 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 MSMO1Q15800 293 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 ZNF695Q8IW36 515 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 ZNF680Q8NEM1 530 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 KCNS2Q9ULS6 477 aa18.32■□□□□ 0.52
CCDC7-201ENST00000277657 NKX6-3A6NJ46 265 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 TNFRSF13BO14836 293 aaPredicted RBP18.31■□□□□ 0.52
CCDC7-201ENST00000277657 PET100P0DJ07 73 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 ZBTB34Q8NCN2 500 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 JPT1Q9UK76 154 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 IGHV1-69-2A0A0G2JMI3 117 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 AP2S1P53680 142 aaPredicted RBP18.31■□□□□ 0.52
CCDC7-201ENST00000277657 OR51H1Q8NH63 302 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 RBPMSQ93062 196 aaKnown RBP18.31■□□□□ 0.52
CCDC7-201ENST00000277657 CNTNAP3BQ96NU0 1288 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 CNTNAP3Q9BZ76 1288 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 CALYQ9NYX4 217 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 OR5AC2Q9NZP5 309 aa18.31■□□□□ 0.52
CCDC7-201ENST00000277657 SPTBN1Q01082 2364 aaKnown RBP18.3■□□□□ 0.52
CCDC7-201ENST00000277657 ABCA4P78363 2273 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 IGHV3-43A0A0B4J1X8 118 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 TMPRSS2O15393 492 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 ATP6V1G1O75348 118 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 IGHV3-43DP0DP04 118 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 PPOXP50336 477 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 LOXL3P58215 753 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 EIF4EBP1Q13541 118 aaPredicted RBP18.3■□□□□ 0.52
CCDC7-201ENST00000277657 NDUFA5Q16718 116 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 C17orf58Q2M2W7 97 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 ESCO2Q56NI9 601 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 INO80EQ8NBZ0 244 aaPredicted RBP18.3■□□□□ 0.52
CCDC7-201ENST00000277657 FAM216AQ8WUB2 273 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 DCUN1D4Q92564 292 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 OR2D2Q9H210 308 aa18.3■□□□□ 0.52
CCDC7-201ENST00000277657 TCF23Q7RTU1 214 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 CORO2AQ92828 525 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 AGMATQ9BSE5 352 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 RNF150Q9ULK6 438 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 YPEL1O60688 119 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 RP2O75695 350 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 CFDP00746 253 aaPredicted RBP18.29■□□□□ 0.52
CCDC7-201ENST00000277657 MORN2Q502X0 79 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 NMSQ5H8A3 153 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 FAM219AQ8IW50 185 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 OR1S1Q8NH92 325 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 RRNAD1Q96FB5 475 aaKnown RBP18.29■□□□□ 0.52
CCDC7-201ENST00000277657 C5orf30Q96GV9 206 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 YPEL2Q96QA6 119 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 LINC00574Q9H8X3 128 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 RAB9BQ9NP90 201 aa18.29■□□□□ 0.52
CCDC7-201ENST00000277657 LIN7CQ9NUP9 197 aaKnown RBP18.29■□□□□ 0.52
CCDC7-201ENST00000277657 TRGV10A0A0A0MS01 117 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 PIGBOS1A0A0B4J2F0 54 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 KBTBD11-OT1A0A1B0GTJ5 212 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 VDAC1P21796 283 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 S100A10P60903 97 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 EDARADDQ8WWZ3 215 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 CLN8Q9UBY8 286 aa18.28■□□□□ 0.52
CCDC7-201ENST00000277657 CLEC18AA5D8T8 446 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 RNF212BA8MTL3 300 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 MBPP02686 304 aaPredicted RBP18.27■□□□□ 0.52
CCDC7-201ENST00000277657 SERPINE2P07093 398 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 EXOSC2Q13868 293 aaKnown RBP18.27■□□□□ 0.52
CCDC7-201ENST00000277657 FGFRL1Q8N441 504 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 CLEC18CQ8NCF0 446 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 OR52M1Q8NGK5 317 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 OR4D5Q8NGN0 318 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 GNG12Q9UBI6 72 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 ITGB1BP2Q9UKP3 347 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 ARID1AO14497 2285 aa18.27■□□□□ 0.52
CCDC7-201ENST00000277657 HRNRQ86YZ3 2850 aaPredicted RBP18.27■□□□□ 0.51
CCDC7-201ENST00000277657 KCNAB3O43448 404 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 DEDDO75618 318 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 FCN3O75636 299 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 IFNA7P01567 189 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 LTC4SQ16873 150 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 HFEQ30201 348 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 PLEKHF2Q9H8W4 249 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 KAAG1Q9UBP8 84 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 SLC25A10Q9UBX3 287 aaPredicted RBP18.26■□□□□ 0.51
CCDC7-201ENST00000277657 ZNF585BQ52M93 769 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 C11orf71Q6IPW1 123 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 SLC51BQ86UW2 128 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 AQP10Q96PS8 301 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 SPIN2AQ99865 258 aa18.26■□□□□ 0.51
CCDC7-201ENST00000277657 SPIN2BQ9BPZ2 258 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms