RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 BSPH1Q075Z2 132 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 GPR157Q5UAW9 335 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 ZNF695Q8IW36 515 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 FAM219AQ8IW50 185 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 OR1A1Q9P1Q5 309 aa12.84□□□□□ -0.35
SF3B4-201ENST00000271628 LSM5Q9Y4Y9 91 aaKnown RBP12.84□□□□□ -0.35
SF3B4-201ENST00000271628 TLN1Q9Y490 2541 aaKnown RBP12.84□□□□□ -0.35
SF3B4-201ENST00000271628 CADP27708 2225 aa12.83□□□□□ -0.35
SF3B4-201ENST00000271628 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
SF3B4-201ENST00000271628 CDS2O95674 445 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 IGHV1-46P01743 117 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 C1QTNF9P0C862 333 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 IL2RGP31785 369 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 CEACAM6P40199 344 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 ID4P47928 161 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 ASCL1P50553 236 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 DVL1P1P54792 670 aaPredicted RBP12.83□□□□□ -0.36
SF3B4-201ENST00000271628 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
SF3B4-201ENST00000271628 TRAT1Q6PIZ9 186 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 LURAP1Q96LR2 239 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 ARV1Q9H2C2 271 aa12.83□□□□□ -0.36
SF3B4-201ENST00000271628 FAM212BQ9NTI7 297 aaPredicted RBP12.83□□□□□ -0.36
SF3B4-201ENST00000271628 RBM7Q9Y580 266 aaKnown RBP12.83□□□□□ -0.36
SF3B4-201ENST00000271628 H0Y980 276 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 FBXO24O75426 580 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 MBPP02686 304 aaPredicted RBP12.82□□□□□ -0.36
SF3B4-201ENST00000271628 WNT2P09544 360 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 EGR1P18146 543 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 UCP1P25874 307 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 TESK1Q15569 626 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 SWI5Q1ZZU3 235 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 MEX3BQ6ZN04 569 aaKnown RBP12.82□□□□□ -0.36
SF3B4-201ENST00000271628 CBLN2Q8IUK8 224 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 CD177Q8N6Q3 437 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 IL22RA2Q969J5 263 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 COQ2Q96H96 371 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 SNX22Q96L94 193 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 WFIKKN1Q96NZ8 548 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 ESRP2Q9H6T0 727 aaKnown RBP12.82□□□□□ -0.36
SF3B4-201ENST00000271628 FAM96BQ9Y3D0 163 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
SF3B4-201ENST00000271628 SFTA3P0C7M3 94 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 SEC11BP0C7V7 166 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 F2RP25116 425 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 NPBWR1P48145 328 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 HOXA4Q00056 320 aaPredicted RBP12.82□□□□□ -0.36
SF3B4-201ENST00000271628 COMMD1Q8N668 190 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 RNF7Q9UBF6 113 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 IGF2RP11717 2491 aa12.82□□□□□ -0.36
SF3B4-201ENST00000271628 IGKV1D-17A0A075B6S4 117 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 BORCS7-ASMTA0A0B4J1R7 106 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 C12orf77C9JDV5 145 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 MGST3O14880 152 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 GPR137BO60478 399 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 ZNF737O75373 536 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 ADH4P08319 380 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 TNFRSF1AP19438 455 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 CHRNB4P30926 498 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 NINJ1Q92982 152 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 SPIN2AQ99865 258 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 SPIN2BQ9BPZ2 258 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
SF3B4-201ENST00000271628 OR4A8P0C604 315 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 GZMHP20718 246 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 P2RY1P47900 373 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 UNQ6494/PRO21346Q6UXR6 183 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 Q6ZRG5 221 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 IQCF2Q8IXL9 164 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 LINC00518Q8N0U6 118 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 Q8TCH9 128 aa12.81□□□□□ -0.36
SF3B4-201ENST00000271628 CCL21O00585 134 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 HBZP02008 142 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 VDAC1P21796 283 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 CD80P33681 288 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 GLIPR1P48060 266 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 SPRNQ5BIV9 151 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 SELENOHQ8IZQ5 122 aaKnown RBP12.8□□□□□ -0.36
SF3B4-201ENST00000271628 ZBTB34Q8NCN2 500 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 MRGPRDQ8TDS7 321 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 FAM222BQ8WU58 562 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
SF3B4-201ENST00000271628 C17orf100A8MU93 164 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 ST8SIA3O43173 380 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 TNFSF12O43508 249 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 CD55P08174 381 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 OR8U9P0C7N5 309 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 IRF2P14316 349 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 RAB5CP51148 216 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 NCMAPQ5T1S8 102 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
SF3B4-201ENST00000271628 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms