RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CD81P60033 236 aa23.33■■□□□ 1.32
CBX4-201ENST00000269397 LYSMD4Q5XG99 296 aa23.33■■□□□ 1.32
CBX4-201ENST00000269397 REC114Q7Z4M0 266 aa23.33■■□□□ 1.32
CBX4-201ENST00000269397 POM121Q96HA1 1249 aa23.33■■□□□ 1.32
CBX4-201ENST00000269397 TMEM41BQ5BJD5 291 aa23.32■■□□□ 1.32
CBX4-201ENST00000269397 NCR3LG1Q68D85 454 aa23.32■■□□□ 1.32
CBX4-201ENST00000269397 DMRTC2Q8IXT2 367 aaPredicted RBP23.32■■□□□ 1.32
CBX4-201ENST00000269397 RPP25LQ8N5L8 163 aaKnown RBP23.32■■□□□ 1.32
CBX4-201ENST00000269397 GTF3AQ92664 365 aaKnown RBP23.32■■□□□ 1.32
CBX4-201ENST00000269397 GPR87Q9BY21 358 aa23.32■■□□□ 1.32
CBX4-201ENST00000269397 WDR61Q9GZS3 305 aaKnown RBP23.32■■□□□ 1.32
CBX4-201ENST00000269397 DLL3Q9NYJ7 618 aa23.32■■□□□ 1.32
CBX4-201ENST00000269397 PSMG3Q9BT73 122 aaPredicted RBP23.32■■□□□ 1.32
CBX4-201ENST00000269397 SLC39A9Q9NUM3 307 aa23.32■■□□□ 1.32
CBX4-201ENST00000269397 MED12LQ86YW9 2145 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 IGHV3-64DA0A0J9YX35 117 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 HBG1P69891 147 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 HBG2P69892 147 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 ZNF585BQ52M93 769 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 TUSC5Q8IXB3 177 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 GATAD1Q8WUU5 269 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 ELOVL1Q9BW60 279 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 GZMHP20718 246 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 RPS16P62249 146 aaKnown RBP23.31■■□□□ 1.32
CBX4-201ENST00000269397 TCEAL6Q6IPX3 200 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 P2RX4Q99571 388 aa23.31■■□□□ 1.32
CBX4-201ENST00000269397 AMBPP02760 352 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 P2RY6Q15077 328 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 FAM58AQ8N1B3 248 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 SLC25A22Q9H936 323 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 SLC25A6P12236 298 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 NDUFB7P17568 137 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 TMEM183AQ8IXX5 376 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 APOBEC3DQ96AK3 386 aaPredicted RBP23.3■■□□□ 1.32
CBX4-201ENST00000269397 PRSS50Q9UI38 385 aa23.3■■□□□ 1.32
CBX4-201ENST00000269397 SERF2P84101 59 aa23.29■■□□□ 1.32
CBX4-201ENST00000269397 SPINK14Q6IE38 97 aa23.29■■□□□ 1.32
CBX4-201ENST00000269397 OR5A2Q8NGI9 324 aa23.29■■□□□ 1.32
CBX4-201ENST00000269397 TAF15Q92804 592 aaKnown RBP eCLIP23.29■■□□□ 1.32
CBX4-201ENST00000269397 RIMS4Q9H426 269 aaPredicted RBP23.29■■□□□ 1.32
CBX4-201ENST00000269397 RNF150Q9ULK6 438 aa23.29■■□□□ 1.32
CBX4-201ENST00000269397 CELA3AP09093 270 aa23.29■■□□□ 1.32
CBX4-201ENST00000269397 GZMBP10144 247 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 MEF2BQ02080 365 aaPredicted RBP23.28■■□□□ 1.32
CBX4-201ENST00000269397 TMEM241Q24JQ0 296 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 OR5P3Q8WZ94 311 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 CTDSP1Q9GZU7 261 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 NAT8Q9UHE5 227 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 SIRPB1O00241 398 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 PFN1P07737 140 aaKnown RBP23.28■■□□□ 1.32
CBX4-201ENST00000269397 GFRA1P56159 465 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 SLC38A11Q08AI6 406 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 SPATA46Q5T0L3 261 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 LSM10Q969L4 123 aaKnown RBP23.28■■□□□ 1.32
CBX4-201ENST00000269397 DOCK10Q96BY6 2186 aa23.28■■□□□ 1.32
CBX4-201ENST00000269397 DEGS1O15121 323 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 CLDN1O95832 211 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 IFNA1P01562 189 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 CFIP05156 583 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.27■■□□□ 1.32
CBX4-201ENST00000269397 SRD5A3Q9H8P0 318 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 CACNA1DQ01668 2161 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 TGOLN2O43493 480 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 DEFA4P12838 97 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 CA6P23280 308 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 BSXQ3C1V8 233 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 PCGF1Q9BSM1 259 aa23.27■■□□□ 1.32
CBX4-201ENST00000269397 XKRY2A2RUG3 117 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 RPL23P62829 140 aaKnown RBP23.26■■□□□ 1.31
CBX4-201ENST00000269397 ACSM6Q6P461 480 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 ZNF66Q6ZN08 573 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 OR5T1Q8NG75 326 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 OR1P1Q8NH06 330 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 A0A1W2PPQ1 181 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 ZNF705GA8MUZ8 300 aaPredicted RBP23.26■■□□□ 1.31
CBX4-201ENST00000269397 GALR1P47211 349 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 PRSS8Q16651 343 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 VASH2Q86V25 355 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 TMEM9BQ9NQ34 198 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 USF3Q68DE3 2245 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 NBEAQ8NFP9 2946 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 TNRC6AQ8NDV7 1962 aaKnown RBP23.26■■□□□ 1.31
CBX4-201ENST00000269397 AHCTF1Q8WYP5 2266 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 JOSD1Q15040 202 aaPredicted RBP23.26■■□□□ 1.31
CBX4-201ENST00000269397 CYP2G1PQ6ZSU1 146 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 PPP1R32Q7Z5V6 425 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 PLA2G3Q9NZ20 509 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 TRAPPC2LQ9UL33 140 aa23.26■■□□□ 1.31
CBX4-201ENST00000269397 PRRC2CQ9Y520 2896 aaKnown RBP23.25■■□□□ 1.31
CBX4-201ENST00000269397 SNRPCP09234 159 aaKnown RBP23.25■■□□□ 1.31
CBX4-201ENST00000269397 APLNRP35414 380 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 OR51G1Q8NGK1 321 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 OR5R1Q8NH85 324 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 TMEM37Q8WXS4 190 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 MISP3Q96FF7 219 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 PARLQ9H300 379 aa23.25■■□□□ 1.31
CBX4-201ENST00000269397 GTF3C1Q12789 2109 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 TNRC6BQ9UPQ9 1833 aaKnown RBP23.24■■□□□ 1.31
CBX4-201ENST00000269397 ANKRD30BLA7E2S9 258 aa23.24■■□□□ 1.31
CBX4-201ENST00000269397 H7BYZ3 331 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms