RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ATRQ13535 2644 aa10.29□□□□□ -0.76
SS18-202ENST00000269138 CLDN34H7C241 214 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 BET1O15155 118 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CEACAM6P40199 344 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 KIR2DS4P43632 304 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 KIR2DS1Q14954 304 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 LY6EQ16553 131 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 SRSF7Q16629 238 aaKnown RBP eCLIP10.28□□□□□ -0.76
SS18-202ENST00000269138 KRTAP24-1Q3LI83 254 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 Q3ZCU0 254 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 Q6ZS49 121 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 SNX29P2Q8IUI4 249 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.76
SS18-202ENST00000269138 DGCR14Q96DF8 476 aaKnown RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 NXF2Q9GZY0 626 aaKnown RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 EXTL2Q9UBQ6 330 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 AMMECR1Q9Y4X0 333 aaPredicted RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 FBN1P35555 2871 aaKnown RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 VGLL3A8MV65 326 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 TRIM77I1YAP6 450 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 HSPA12AO43301 675 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 RGS11O94810 467 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 RNASE1P07998 156 aaKnown RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 ZBTB25P24278 435 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CD24P25063 80 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CEACAM3P40198 252 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 REG1BP48304 166 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 LY6G6FQ5SQ64 297 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CNIH2Q6PI25 160 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 HOGA1Q86XE5 327 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 ODF3L1Q8IXM7 274 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 TMEM86BQ8N661 226 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 MCFD2Q8NI22 146 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 ST6GALNAC6Q969X2 333 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 RPEQ96AT9 228 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CREB3L1Q96BA8 519 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 CABLES2Q9BTV7 478 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 ABHD14AQ9BUJ0 271 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 C6orf62Q9GZU0 229 aaPredicted RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 C11orf54Q9H0W9 315 aaPredicted RBP10.28□□□□□ -0.76
SS18-202ENST00000269138 DPAGT1Q9H3H5 408 aa10.28□□□□□ -0.76
SS18-202ENST00000269138 TRBV6-7A0A0A0MS04 114 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 PRSS3P35030 304 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 AANATQ16613 207 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 C16orf87Q6PH81 154 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 LYG1Q8N1E2 194 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.27□□□□□ -0.77
SS18-202ENST00000269138 OR2AK2Q8NG84 335 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 SNAPC3Q92966 411 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 RBMXL1Q96E39 390 aaKnown RBP10.27□□□□□ -0.77
SS18-202ENST00000269138 IFI27L2Q9H2X8 130 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 RDH8Q9NYR8 311 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 NDUFA13Q9P0J0 144 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 RNF150Q9ULK6 438 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 POMT1Q9Y6A1 747 aa10.27□□□□□ -0.77
SS18-202ENST00000269138 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 HSD17B6O14756 317 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 TIMM23O14925 209 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 GPR137BO60478 399 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 OR3A3P47888 321 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 RNASE12Q5GAN4 147 aaKnown RBP10.26□□□□□ -0.77
SS18-202ENST00000269138 CCBE1Q6UXH8 406 aaPredicted RBP10.26□□□□□ -0.77
SS18-202ENST00000269138 DRAM1Q8N682 238 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 BEST4Q8NFU0 473 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 OR5R1Q8NH85 324 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 OR10J5Q8NHC4 309 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 GPX8Q8TED1 209 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 FAM216AQ8WUB2 273 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 ABHD14BQ96IU4 210 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 ABHD1Q96SE0 405 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 MDFIQ99750 246 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 ABCB10Q9NRK6 738 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 ANXA10Q9UJ72 324 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
SS18-202ENST00000269138 BTBD17A6NE02 478 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 FAM181BA6NEQ2 426 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 GAPDHP04406 335 aaKnown RBP10.25□□□□□ -0.77
SS18-202ENST00000269138 IL3RAP26951 378 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 TNFSF8P32971 234 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 CBX5P45973 191 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 DYNLT3P51808 116 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 ZNF137PP52743 207 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 ZNF816Q0VGE8 651 aaPredicted RBP10.25□□□□□ -0.77
SS18-202ENST00000269138 TMEM219Q86XT9 240 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 H1FOOQ8IZA3 346 aaPredicted RBP10.25□□□□□ -0.77
SS18-202ENST00000269138 RTN4IP1Q8WWV3 396 aaPredicted RBP10.25□□□□□ -0.77
SS18-202ENST00000269138 DIRAS2Q96HU8 199 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 AGMATQ9BSE5 352 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 TOLLIPQ9H0E2 274 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 ADAM30Q9UKF2 790 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 ANAPC10Q9UM13 185 aa10.25□□□□□ -0.77
SS18-202ENST00000269138 SAA2-SAA4A0A096LPE2 208 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 IGHV3-72A0A0B4J1Y9 119 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
SS18-202ENST00000269138 A6NDX4 124 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms