RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 DEDDO75618 318 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 IGHA1P01876 353 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 THBDP07204 575 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 C21orf58P58505 322 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 RAB32Q13637 225 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 NSUN5P1Q3KNT7 163 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 MDP1Q86V88 176 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 STPG3Q8N7X2 389 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ADAMTS17Q8TE56 1095 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 P2RX4Q99571 388 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 NRIP2Q9BQI9 281 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 CHRNA10Q9GZZ6 450 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 PRO3102Q9H379 93 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 PRSS50Q9UI38 385 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 GNG7O60262 68 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 CYB5R3P00387 301 aaPredicted RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 HTR1DP28221 377 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 RPL31P62899 125 aaKnown RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 CCL8P80075 99 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ZIC1Q15915 447 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 ARRDC1Q8N5I2 433 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 BCL2L2Q92843 193 aaPredicted RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 A0A1W2PPV9 198 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 MED19A0JLT2 244 aaPredicted RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 SBK3P0C264 359 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 TMEM33P57088 247 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 GLRX5Q86SX6 157 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 NR2C2APQ86WQ0 139 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 NFAM1Q8NET5 270 aaPredicted RBP6.81□□□□□ -1.32
USP3-201ENST00000268049 Q8WTZ3 238 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 BCL2L10Q9HD36 194 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 CMC2Q9NRP2 79 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 OPN4Q9UHM6 478 aa6.81□□□□□ -1.32
USP3-201ENST00000268049 CA2P00918 260 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 HIST1H1CP16403 213 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 GATA3P23771 443 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 KIR3DL2P43630 455 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 FAM3BP58499 235 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 PPP1R1AQ13522 171 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 RBM45Q8IUH3 476 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 SEC16AO15027 2179 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 TDRD6O60522 2096 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 UBE2L5PA0A1B0GUS4 154 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 LOC107986453A0A1B0GWG9 222 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 UQCRFS1P47985 274 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 MRPS11P82912 194 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 CDCP2Q5VXM1 449 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 PIPOXQ9P0Z9 390 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SLC22A13Q9Y226 551 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 CACNA1IQ9P0X4 2223 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 C9orf170A2RU37 121 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SOD3P08294 240 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 INHBBP09529 407 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 PEBP1P30086 187 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 ZNF260Q3ZCT1 412 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 C6orf201Q7Z4U5 140 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 LDLRAD3Q86YD5 345 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 ALKBH7Q9BT30 221 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 ISG20L2Q9H9L3 353 aaKnown RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 MTFP1Q9UDX5 166 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SLC2A10O95528 541 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 TRGC2P03986 189 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 GALP22466 123 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 MC5RP33032 325 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 G6PCP35575 357 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 IFITM3Q01628 133 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SSX1Q16384 188 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 HIKESHIQ53FT3 197 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 ZNF880Q6PDB4 577 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 OR1P1Q8NH06 330 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 MOGAT1Q96PD6 335 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 MIXL1Q9H2W2 232 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SOX21Q9Y651 276 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 CACNA1HO95180 2353 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 LOC390937A0A1W2PQ73 354 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 FXYD1O00168 92 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 SS18L1O75177 396 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 KIR2DL2P43627 348 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 MVDP53602 400 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 ZNF121P58317 390 aaPredicted RBP6.8□□□□□ -1.32
USP3-201ENST00000268049 PRICKLE4Q2TBC4 344 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 ZNF774Q6NX45 483 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 HSPB9Q9BQS6 159 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 TMED3Q9Y3Q3 217 aa6.8□□□□□ -1.32
USP3-201ENST00000268049 PATJQ8NI35 1801 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 TGIF2-C20orf24A0A0A6YYL0 155 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 CLEC18AA5D8T8 446 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 SHISA8B8ZZ34 492 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 SFT2D2O95562 160 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 GNG4P50150 75 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 LSM6P62312 80 aaKnown RBP6.79□□□□□ -1.32
USP3-201ENST00000268049 ATP5G2Q06055 141 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 DGAT2L7PQ6IED9 249 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OLIG3Q7RTU3 272 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 ARHGEF39Q8N4T4 335 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 AMER3Q8N944 861 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 CLEC18CQ8NCF0 446 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OR13A1Q8NGR1 328 aa6.79□□□□□ -1.32
USP3-201ENST00000268049 OR4S2Q8NH73 311 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms