RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 DNAJC25-GNG10A0A024R161 153 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 K7N7A8 449 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 DANCRP0C864 163 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 FAM157BP0CG42 384 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TMEM50BP56557 158 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 FOXF1Q12946 379 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 LRP10Q7Z4F1 713 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 OR4D5Q8NGN0 318 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ALKBH3Q96Q83 286 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 MMP17Q9ULZ9 603 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ANKRD36CQ5JPF3 1778 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TRGV5A0A0B4J1U4 118 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 SPRY1O43609 319 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 F11P03951 625 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZGLP1P0C6A0 271 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 C8orf88P0DMB2 117 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 RHOGP84095 191 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 FAM222BQ8WU58 562 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ABHD3Q8WU67 409 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 PGLYRP3Q96LB9 341 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZFC3H1O60293 1989 aaKnown RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 RPL36A-HNRNPH2H7BZ11 118 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZNF250P15622 560 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 NUTF2P61970 127 aaKnown RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 LYPD8Q6UX82 237 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 BHLHA15Q7RTS1 189 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 OR8B12Q8NGG6 310 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 IGF2P01344 180 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 HKR1P10072 659 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ARSAP15289 507 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 NR2C2APQ86WQ0 139 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 OR51G1Q8NGK1 321 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ATOH1Q92858 354 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 IMMP2LQ96T52 175 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TIMP4Q99727 224 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TMUB1Q9BVT8 246 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 WNT5BQ9H1J7 359 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 WSB2Q9NYS7 404 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 INSIG2Q9Y5U4 225 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 MUC1P15941 1255 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 SELENOPP49908 381 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 NUBP1P53384 320 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 FAM78AQ5JUQ0 283 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 RNFT1Q5M7Z0 435 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TIMM23BQ5SRD1 257 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 SAXO1Q8IYX7 474 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 GAPTQ8N292 157 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZNF714Q96N38 554 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 SLC26A1Q9H2B4 701 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 PXMP4Q9Y6I8 212 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 AKAP12Q02952 1782 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TMEM177Q53S58 311 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 CYP2G1PQ6ZSU1 146 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 SHISA5Q8N114 240 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 C17orf47Q8NEP4 570 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 RNF7Q9UBF6 113 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 GPR132Q9UNW8 380 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 PIK3C2AO00443 1686 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 A8MWV9 139 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 TSPAN2O60636 221 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 PNLIPP16233 465 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 CTSSP25774 331 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 DLX6P56179 175 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ATXN8Q156A1 80 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZNF658BQ4V348 819 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 TM4SF20Q53R12 229 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 ZNF683Q8IZ20 524 aa4.78□□□□□ -1.64
XRN1-201ENST00000264951 CNRIP1Q96F85 164 aaPredicted RBP4.78□□□□□ -1.64
XRN1-201ENST00000264951 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.78□□□□□ -1.65
XRN1-201ENST00000264951 LGALS1P09382 135 aaKnown RBP4.78□□□□□ -1.65
XRN1-201ENST00000264951 CNTFRP26992 372 aa4.78□□□□□ -1.65
XRN1-201ENST00000264951 IRF3Q14653 427 aa4.78□□□□□ -1.65
XRN1-201ENST00000264951 FAM27D1Q5T7N8 215 aa4.78□□□□□ -1.65
XRN1-201ENST00000264951 SIT1Q9Y3P8 196 aa4.78□□□□□ -1.65
XRN1-201ENST00000264951 TBL2Q9Y4P3 447 aaKnown RBP4.78□□□□□ -1.65
XRN1-201ENST00000264951 FFAR1O14842 300 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 PHLDA1Q8WV24 401 aaPredicted RBP4.77□□□□□ -1.65
XRN1-201ENST00000264951 A0A096LPE4 126 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 A0A1W2PNR3 127 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 A0A1W2PPZ6 126 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 MGST3O14880 152 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 ANOS1P23352 680 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 SRIP30626 198 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 MVDP53602 400 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 TMEM179BQ7Z7N9 219 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 SMIM8Q96KF7 97 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 LTB4R2Q9NPC1 389 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 OR51B2Q9Y5P1 312 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 CACNA1EQ15878 2313 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 SCN3AQ9NY46 2000 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 FCGR3AP08637 254 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 SP9P0CG40 484 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 SSMEM1Q8WWF3 244 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 GPR82Q96P67 336 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 COL14A1Q05707 1796 aaKnown RBP4.77□□□□□ -1.65
XRN1-201ENST00000264951 HLA-DQB1P01920 261 aa4.77□□□□□ -1.65
XRN1-201ENST00000264951 RPL8P62917 257 aaKnown RBP4.77□□□□□ -1.65
XRN1-201ENST00000264951 GGTLC2Q14390 218 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms