RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 BMP5P22003 454 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 KHDC3LQ587J8 217 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 VN1R17PQ8TDU5 208 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 RNF126Q9BV68 326 aa13.98□□□□□ -0.17
CTCF-201ENST00000264010 IGKV1-12A0A0C4DH73 117 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 RNF212BA8MTL3 300 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 CYB5R3P00387 301 aaPredicted RBP13.97□□□□□ -0.17
CTCF-201ENST00000264010 IGKV1D-12P01611 117 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 SPINK2P20155 84 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 PMCHP20382 165 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 UCP3P55916 312 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 SUPT4H1P63272 117 aaKnown RBP13.97□□□□□ -0.17
CTCF-201ENST00000264010 DNAJC4Q9NNZ3 241 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 RCC2Q9P258 522 aaKnown RBP13.97□□□□□ -0.17
CTCF-201ENST00000264010 TECTAO75443 2155 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 DBX1A6NMT0 343 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 HSBP1L1C9JCN9 74 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 GTF2H5Q6ZYL4 71 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 MOB1BQ7L9L4 216 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 TBC1D26Q86UD7 250 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 OR11L1Q8NGX0 322 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 PLEKHF2Q9H8W4 249 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 TGIF2-C20orf24A0A0A6YYL0 155 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 CLDN34H7C241 214 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 MYPOPQ86VE0 399 aaPredicted RBP13.97□□□□□ -0.17
CTCF-201ENST00000264010 SSC4DQ8WTU2 575 aa13.97□□□□□ -0.17
CTCF-201ENST00000264010 NCOA6Q14686 2063 aaPredicted RBP13.97□□□□□ -0.17
CTCF-201ENST00000264010 MEX3AA1L020 520 aaKnown RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 ANOS1P23352 680 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 FHITP49789 147 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 PAX5Q02548 391 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 OR13D1Q8NGV5 346 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 SPSB4Q96A44 273 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 MRGPRFQ96AM1 343 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 BORCS7Q96B45 105 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 SLC39A9Q9NUM3 307 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 TMEM100Q9NV29 134 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 FUT9Q9Y231 359 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 CDX4O14627 284 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 SYNGR1O43759 233 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 SSSCA1O60232 199 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 DEDDO75618 318 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 PMELP40967 661 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 PMP22Q01453 160 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 PPP1R35Q8TAP8 253 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 ZNF488Q96MN9 340 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 CIB3Q96Q77 187 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 ATP5SQ99766 215 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 GP6Q9HCN6 339 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 H3BQ15 152 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 NKX2-8O15522 239 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 MDH2P40926 338 aaKnown RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 LPAR6P43657 344 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 WDR25Q64LD2 544 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 DMRTC2Q8IXT2 367 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 ADAMTS17Q8TE56 1095 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 NTNG2Q96CW9 530 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 ZNF552Q9H707 407 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 AURKAIP1Q9NWT8 199 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 ERRFI1Q9UJM3 462 aaPredicted RBP13.96□□□□□ -0.17
CTCF-201ENST00000264010 PROCRQ9UNN8 238 aa13.96□□□□□ -0.17
CTCF-201ENST00000264010 EP300Q09472 2414 aaPredicted RBP13.96□□□□□ -0.18
CTCF-201ENST00000264010 MSGN1A6NI15 193 aa13.96□□□□□ -0.18
CTCF-201ENST00000264010 H0YIZ8 118 aa13.96□□□□□ -0.18
CTCF-201ENST00000264010 TMEM187Q14656 261 aa13.96□□□□□ -0.18
CTCF-201ENST00000264010 ARSJQ5FYB0 599 aaPredicted RBP13.96□□□□□ -0.18
CTCF-201ENST00000264010 GAPTQ8N292 157 aa13.96□□□□□ -0.18
CTCF-201ENST00000264010 POM121L2Q96KW2 1035 aa13.96□□□□□ -0.18
CTCF-201ENST00000264010 CDS2O95674 445 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 FTH1P19P0C7X4 201 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 FOXG1P55316 489 aaPredicted RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 ASCL4Q6XD76 172 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 GALNT14Q96FL9 552 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 PARD6GQ9BYG4 376 aaPredicted RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 TUSC2O75896 110 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 HKR1P10072 659 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 P2RY1P47900 373 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 RPL24P83731 157 aaKnown RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 ZNF718Q3SXZ3 478 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 Q9N2K0 584 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 STRAPQ9Y3F4 350 aaKnown RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 SPTBN1Q01082 2364 aaKnown RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 H0YL77 283 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 TRGC1P0CF51 173 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 CHRNA7P36544 502 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 EIF4E3Q8N5X7 224 aaKnown RBP13.95□□□□□ -0.18
CTCF-201ENST00000264010 SIGLECL1Q8N7X8 197 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 LFNGQ8NES3 379 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 ZDHHC11Q9H8X9 412 aa13.95□□□□□ -0.18
CTCF-201ENST00000264010 ADAM20O43506 726 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 SOD3P08294 240 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 SCTP09683 121 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 HINT1P49773 126 aaPredicted RBP13.94□□□□□ -0.18
CTCF-201ENST00000264010 INO80CQ6PI98 192 aaPredicted RBP13.94□□□□□ -0.18
CTCF-201ENST00000264010 Q6ZSR3 168 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 PKIBQ9C010 78 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 CCL28Q9NRJ3 127 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 PPP1R3CQ9UQK1 317 aa13.94□□□□□ -0.18
CTCF-201ENST00000264010 GAPDHP04406 335 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms