RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 REPIN1Q9BWE0 567 aaKnown RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 DLL3Q9NYJ7 618 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 CLN8Q9UBY8 286 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 SIT1Q9Y3P8 196 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 TRAV24A0A0B4J272 114 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 A0A1B0GU03 582 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 K7ESF4 209 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 TFF1P04155 84 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 GRPP07492 148 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 PLGLB1Q02325 96 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 SLC38A11Q08AI6 406 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF66Q6ZN08 573 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF525Q8N782 197 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 C14orf144Q96I85 54 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 MED13Q9UHV7 2174 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 SYNGR4O95473 234 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 IFNA1P01562 189 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 CTXN2P0C2S0 81 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 CEACAM6P40199 344 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 UBE2G2P60604 165 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 COL19A1Q14993 1142 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 BTNL3Q6UXE8 466 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 APOBEC3DQ96AK3 386 aaPredicted RBP10.53□□□□□ -0.72
CHMP3-201ENST00000263856 TECTBQ96PL2 329 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 PRDM14Q9GZV8 571 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 H7BYZ3 331 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 YKT6O15498 198 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 HIST1H1BP16401 226 aaKnown RBP10.53□□□□□ -0.72
CHMP3-201ENST00000263856 HNF1AP20823 631 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 G6PCP35575 357 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 MAGEA5P43359 124 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 P2RY6Q15077 328 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 HAPLN4Q86UW8 402 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 OR8G5Q8NG78 346 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 SDSLQ96GA7 329 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 HIST1H2BLQ99880 126 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 SDF2L1Q9HCN8 221 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 WASF3Q9UPY6 502 aa10.53□□□□□ -0.72
CHMP3-201ENST00000263856 APLNRP35414 380 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 ZNF324BQ6AW86 544 aaPredicted RBP10.52□□□□□ -0.73
CHMP3-201ENST00000263856 ALKBH2Q6NS38 261 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 CA5BP1Q8WTZ4 195 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 PCGF1Q9BSM1 259 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 GPR87Q9BY21 358 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 CISD1Q9NZ45 108 aaKnown RBP10.52□□□□□ -0.73
CHMP3-201ENST00000263856 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 XKRY2A2RUG3 117 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 DDTP30046 118 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 IL2RGP31785 369 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 MAS1LP35410 378 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 CHRNA7P36544 502 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 COL10A1Q03692 680 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 TDHQ8IZJ6 230 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 OR4X1Q8NH49 305 aa10.52□□□□□ -0.73
CHMP3-201ENST00000263856 DSPP15924 2871 aaKnown RBP10.52□□□□□ -0.73
CHMP3-201ENST00000263856 IFNL4K9M1U5 179 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-201ENST00000263856 CYTIPO60759 359 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 CRYAAP02489 173 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 GALR1P47211 349 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 LINC00205P59089 165 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 RIPPLY2Q5TAB7 128 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 PPP1R32Q7Z5V6 425 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 APH1AQ96BI3 265 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 FAM234AQ9H0X4 552 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 SH2D2AQ9NP31 389 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 PRSS50Q9UI38 385 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 ELOA3CA0A087WX78 387 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-201ENST00000263856 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 CDIPTO14735 213 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 NXPH2O95156 264 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 OR8G1Q15617 311 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 BSXQ3C1V8 233 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TPRX1Q8N7U7 411 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 OR13D1Q8NGV5 346 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TMEM204Q9BSN7 226 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TCFL5Q9UL49 500 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 FUT9Q9Y231 359 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 IGHV3-43A0A0B4J1X8 118 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 RAMP3O60896 148 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 SNRPCP09234 159 aaKnown RBP10.51□□□□□ -0.73
CHMP3-201ENST00000263856 IGHV3-43DP0DP04 118 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 FGF7P21781 194 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 GNG3P63215 75 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 PNRC1Q12796 327 aaPredicted RBP10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TMEM41BQ5BJD5 291 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TMPRSS7Q7RTY8 843 aa10.51□□□□□ -0.73
CHMP3-201ENST00000263856 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms