RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 UBAC2Q8NBM4 344 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 OR10G9Q8NGN4 311 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM54Q969K7 222 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 DDIT4LQ96D03 193 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 ZMYND19Q96E35 227 aaPredicted RBP2.89□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF799Q96GE5 643 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 DNAJC30Q96LL9 226 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 CNBD2Q96M20 576 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 CMSS1Q9BQ75 279 aaKnown RBP2.89□□□□□ -1.95
CCDC54-201ENST00000261058 GINS3Q9BRX5 216 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 LXNQ9BS40 222 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 MARVELD1Q9BSK0 173 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 FAAP24Q9BTP7 215 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 SNHG12Q9BXW3 62 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 SETD5Q9C0A6 1442 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM126AQ9H061 195 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 ABCG5Q9H222 651 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 CST9LQ9H4G1 147 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 ENY2Q9NPA8 101 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM38BQ9NVV0 291 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 RBM22Q9NW64 420 aaKnown RBP eCLIP2.89□□□□□ -1.95
CCDC54-201ENST00000261058 KCNIP1Q9NZI2 227 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 CLCF1Q9UBD9 225 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 HSPB8Q9UJY1 196 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 KCNE3Q9Y6H6 103 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 PSME4Q14997 1843 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 NACAE9PAV3 2078 aa2.89□□□□□ -1.95
CCDC54-201ENST00000261058 ABCC10Q5T3U5 1492 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 IGSF9BQ9UPX0 1349 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TRAV30A0A087WSZ9 112 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 A0A087WUJ7 227 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TRAV39A0A0B4J263 110 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 A0A0B4J2A0 478 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM150BA6NC51 233 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 MAP1LC3B2A6NCE7 125 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CEACAM18A8MTB9 384 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 DEGS1O15121 323 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CCL25O15444 150 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 OR7C2O60412 319 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 UPK1BO75841 260 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 OR7C1O76099 320 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CDS2O95674 445 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 INSP01308 110 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 DBIP07108 87 aaKnown RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 UBBP0CG47 229 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 SULT1A3P0DMM9 295 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 SULT1A4P0DMN0 295 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CD79AP11912 226 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 IL1RNP18510 177 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 RCC1P18754 421 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CD34P28906 385 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 RPL12P30050 165 aaKnown RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CMPK1P30085 196 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 GALR1P47211 349 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF133P52736 654 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 SLC35A1P78382 337 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 RHEBQ15382 184 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 LRRC75BQ2VPJ9 315 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CLEC12AQ5QGZ9 265 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TNFAIP8L2Q6P589 184 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 AGTRAPQ6RW13 159 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 ACP7Q6ZNF0 438 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF620Q6ZNG0 422 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 NAA40Q86UY6 237 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 H1FOOQ8IZA3 346 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TCTE3Q8IZS6 198 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 ZADH2Q8N4Q0 377 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 OR10G4Q8NGN3 311 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 OR9I1Q8NGQ6 314 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 GPR119Q8TDV5 335 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 LCN9Q8WX39 176 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 ARL11Q969Q4 196 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM230Q96A57 120 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TMEM159Q96B96 161 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 MAP1LC3BQ9GZQ8 125 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 RNF122Q9H9V4 155 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 EXOSC4Q9NPD3 245 aaKnown RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 SAR1AQ9NR31 198 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 FAM49BQ9NUQ9 324 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 FAM206AQ9NX38 181 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 SHPKQ9UHJ6 478 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 RAB22AQ9UL26 194 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 TRAPPC4Q9Y296 219 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 LSM5Q9Y4Y9 91 aaKnown RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 PCYT1BQ9Y5K3 369 aaPredicted RBP2.88□□□□□ -1.95
CCDC54-201ENST00000261058 VWA8A3KMH1 1905 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 KDM5DQ9BY66 1539 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 GOLGA3Q08378 1498 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 MBD5Q9P267 1494 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 MYH11P35749 1972 aa2.88□□□□□ -1.95
CCDC54-201ENST00000261058 CD109Q6YHK3 1445 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 PNMA8CA0A1B0GUJ8 204 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 FAM240AA0A1B0GVK7 77 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 DAPL1A0PJW8 107 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 FAM159BA6NKW6 160 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF726A6NNF4 738 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 E7EQ34 232 aa2.87□□□□□ -1.95
CCDC54-201ENST00000261058 GABRPO00591 440 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms