RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 VDAC1P21796 283 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 HTR2CP28335 458 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 PPIFP30405 207 aaKnown RBP13.19□□□□□ -0.3
CGREF1-201ENST00000260595 RPS27AP62979 156 aaKnown RBP13.19□□□□□ -0.3
CGREF1-201ENST00000260595 QRFPP83859 136 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 MMDQ15546 238 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 ZNF833PQ6ZTB9 187 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 MYOZ3Q8TDC0 251 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 PHYHIPQ92561 330 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 GALMQ96C23 342 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 NEDD4LQ96PU5 975 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 FAAP24Q9BTP7 215 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 MND1Q9BWT6 205 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 TM2D1Q9BX74 207 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 LRRC42Q9Y546 428 aa13.19□□□□□ -0.3
CGREF1-201ENST00000260595 TMEM14DPA8MWL7 114 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 CNTFRP26992 372 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 OR3A3P47888 321 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 ACTBP60709 375 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 UNC119Q13432 240 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 KIAA0141Q14154 515 aaPredicted RBP13.18□□□□□ -0.3
CGREF1-201ENST00000260595 GLT8D1Q68CQ7 371 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 ZNF880Q6PDB4 577 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 C6orf201Q7Z4U5 140 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 B9D2Q9BPU9 175 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 NICN1Q9BSH3 213 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 TMED9Q9BVK6 235 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 KCNK15Q9H427 330 aa13.18□□□□□ -0.3
CGREF1-201ENST00000260595 PTGES3LE9PB15 166 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 SLC22A1O15245 554 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 NAPSAO96009 420 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 UCHL1P09936 223 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 SRMP19623 302 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 MYF6P23409 242 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 LUMP51884 338 aaPredicted RBP13.17□□□□□ -0.3
CGREF1-201ENST00000260595 RAB25P57735 213 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 DGCR2P98153 550 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 FHL3Q13643 280 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 IRF3Q14653 427 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 SPHARQ15513 63 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
CGREF1-201ENST00000260595 CEACAM19Q7Z692 300 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 SVOPQ8N4V2 548 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 KCNG3Q8TAE7 436 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 C4orf3Q8WVX3 66 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 ZNF251Q9BRH9 671 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 CHCHD6Q9BRQ6 235 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 TMEM59Q9BXS4 323 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 KLK15Q9H2R5 256 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
CGREF1-201ENST00000260595 SAA2-SAA4A0A096LPE2 208 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 A0A0A6YYD4 124 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 IGHV7-81A0A0B4J1V7 117 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 G3V318 75 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 RGS11O94810 467 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 HLA-DRB1P01911 266 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 SAA2P0DJI9 122 aaPredicted RBP13.16□□□□□ -0.3
CGREF1-201ENST00000260595 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 NPBQ8NG41 125 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 ANKRD60Q9BZ19 345 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 OR51J1Q9H342 316 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 ZMAT5Q9UDW3 170 aaKnown RBP13.16□□□□□ -0.3
CGREF1-201ENST00000260595 SCOCQ9UIL1 159 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 WSB1Q9Y6I7 421 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
CGREF1-201ENST00000260595 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 NBR2O15453 112 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 RAMP3O60896 148 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 NDUFA3O95167 84 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 IGLV1-40P01703 118 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 CD69Q07108 199 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 C5orf64Q2M2E5 130 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 HSD17B12Q53GQ0 312 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 FAM71F2Q6NXP2 309 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 OR2AK2Q8NG84 335 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 GFI1Q99684 422 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 ABRACLQ9P1F3 81 aa13.15□□□□□ -0.3
CGREF1-201ENST00000260595 NKX1-2Q9UD57 310 aaPredicted RBP13.15□□□□□ -0.3
CGREF1-201ENST00000260595 TRBV6-6A0A0A6YYG2 114 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 ANKRD65E5RJM6 399 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 I3L521 148 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 BPNT1O95861 308 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 BLVRBP30043 206 aaPredicted RBP13.14□□□□□ -0.31
CGREF1-201ENST00000260595 MED22Q15528 200 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 C9orf66Q5T8R8 295 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 ASPHD1Q5U4P2 390 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 LIN54Q6MZP7 749 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 TMEM91Q6ZNR0 172 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 ZNF491Q8N8L2 437 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 OR11H1Q8NG94 326 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 IL1F10Q8WWZ1 152 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 UBE2E2Q96LR5 201 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 PARP12Q9H0J9 701 aaKnown RBP13.14□□□□□ -0.31
CGREF1-201ENST00000260595 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 VCXQ9H320 206 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms