RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 RARRES2Q99969 163 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 OR51I2Q9H344 312 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 RAB18Q9NP72 206 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 RPS10P5Q9NQ39 176 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 A0A0U1RQK1 487 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 HMSDA8MTL9 139 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 PGLYRP1O75594 196 aaPredicted RBP7.66□□□□□ -1.18
CKAP2-201ENST00000258607 CD24P25063 80 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 NAAAQ02083 359 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 SSBP1Q04837 148 aaKnown RBP7.66□□□□□ -1.18
CKAP2-201ENST00000258607 RTL6Q6ICC9 239 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 POC1AQ8NBT0 407 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 GALMQ96C23 342 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 MRPL37Q9BZE1 423 aaKnown RBP7.66□□□□□ -1.18
CKAP2-201ENST00000258607 ALX4Q9H161 411 aaPredicted RBP7.66□□□□□ -1.18
CKAP2-201ENST00000258607 CLCF1Q9UBD9 225 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 C2CD3Q4AC94 2353 aa7.66□□□□□ -1.18
CKAP2-201ENST00000258607 KIR2DS1A0A191URI9 304 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 ENSAO43768 121 aaKnown RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 ATG12O94817 140 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 CLDN14O95500 239 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 TMEM50AO95807 157 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 IGLV3-1P01715 115 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 PET100P0DJ07 73 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 RPL35P42766 123 aaKnown RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 KIR2DS4P43632 304 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 KLF3P57682 345 aaPredicted RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 SELENOVP59797 346 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 RPL30P62888 115 aaKnown RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 TNFAIP6P98066 277 aaPredicted RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 KIR2DS1Q14954 304 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 SSC4DQ8WTU2 575 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 TMEM45BQ96B21 275 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 CLCC1Q96S66 551 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 POLDIP2Q9Y2S7 368 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 HCFC1P51610 2035 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 COL5A1P20908 1838 aaPredicted RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 IGSF23A1L1A6 192 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 C17orf98A8MV24 154 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 LINC01387J3KSC0 135 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 S1PR2O95136 353 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 MUC1P15941 1255 aaPredicted RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 CCL3L1P16619 93 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 TMEM42Q69YG0 159 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 DNM1P46Q6ZS02 220 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 FOXL2NBQ6ZUU3 175 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 RXFP4Q8TDU9 374 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 MRPS24Q96EL2 167 aaKnown RBP7.65□□□□□ -1.18
CKAP2-201ENST00000258607 RHOFQ9HBH0 211 aa7.65□□□□□ -1.18
CKAP2-201ENST00000258607 HIVEP2P31629 2446 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 VPS13CQ709C8 3753 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 TUBAL3A6NHL2 446 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 TBPP20226 339 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 PVALBP20472 110 aaPredicted RBP7.65□□□□□ -1.19
CKAP2-201ENST00000258607 PRDX2P32119 198 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 BSPH1Q075Z2 132 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 ARL6IP1Q15041 203 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 WDR82Q6UXN9 313 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 OR2C3Q8N628 320 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 DRAM1Q8N682 238 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 MARC2Q969Z3 335 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 MOB3AQ96BX8 217 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 GPR146Q96CH1 333 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 GNG13Q9P2W3 67 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 OR2W1Q9Y3N9 320 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 MPC1Q9Y5U8 109 aa7.65□□□□□ -1.19
CKAP2-201ENST00000258607 C9JQL5 133 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 TUBG1P23258 451 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 UBE2G2P60604 165 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 CCL20P78556 96 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 HLA-DRB3P79483 266 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 PRR31Q5SQ13 230 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 BVESQ8NE79 360 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 RNF141Q8WVD5 230 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 SPACA1Q9HBV2 294 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 WSB1Q9Y6I7 421 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 OR5B21A6NL26 309 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 CCL21O00585 134 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 IFNA10P01566 189 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 CYC1P08574 325 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 NPBWR1P48145 328 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 EWSR1Q01844 656 aaKnown RBP eCLIP7.64□□□□□ -1.19
CKAP2-201ENST00000258607 MPV17LQ2QL34 196 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 COLCA1Q6ZS62 124 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 DOLPP1Q86YN1 238 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 OR8G5Q8NG78 346 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 MSI2Q96DH6 328 aaKnown RBP7.64□□□□□ -1.19
CKAP2-201ENST00000258607 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 CHD6Q8TD26 2715 aa7.64□□□□□ -1.19
CKAP2-201ENST00000258607 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 SLC31A2O15432 143 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 F2RP25116 425 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 SSTP61278 116 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 CD177Q8N6Q3 437 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 PINX1Q96BK5 328 aaKnown RBP7.63□□□□□ -1.19
CKAP2-201ENST00000258607 SLC25A22Q9H936 323 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 DECR2Q9NUI1 292 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 Q9UFV3 132 aa7.63□□□□□ -1.19
CKAP2-201ENST00000258607 EDARQ9UNE0 448 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms