RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 OR1L3Q8NH93 324 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 C4orf45Q96LM5 186 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 SAMD10Q9BYL1 202 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 TTTY10Q9BZA0 68 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 ULBP3Q9BZM4 244 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 PKIBQ9C010 78 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 CALHM2Q9HA72 323 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 ZFHX4Q86UP3 3567 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 A0A087WV48 116 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 IGKV1-8A0A0C4DH67 115 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 M0R1X1 148 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 NUPR1O60356 82 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 DBHP09172 617 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 RPL23P62829 140 aaKnown RBP10.17□□□□□ -0.78
CCNA1-201ENST00000255465 CD226Q15762 336 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 LIAT1Q6ZQX7 453 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 ZFP62Q8NB50 900 aaPredicted RBP10.17□□□□□ -0.78
CCNA1-201ENST00000255465 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
CCNA1-201ENST00000255465 USP24Q9UPU5 2620 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 A0A1B0GV50 99 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 H3BMH7 237 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 KLK10O43240 276 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 SCRG1O75711 98 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 NRASP01111 189 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 KRASP01116 189 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 GPX1P07203 203 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 CD55P08174 381 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 NPPBP16860 134 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 IL3RAP26951 378 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 DUSP1P28562 367 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 GUCA1AP43080 201 aaPredicted RBP10.16□□□□□ -0.78
CCNA1-201ENST00000255465 ZNF136P52737 540 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 PPP1CBP62140 327 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 RHOBP62745 196 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 CSNK2A1P68400 391 aaPredicted RBP10.16□□□□□ -0.78
CCNA1-201ENST00000255465 PSG9Q00887 426 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 EWSR1Q01844 656 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCNA1-201ENST00000255465 GNMTQ14749 295 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 SPIN3Q5JUX0 258 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 GLYATL3Q5SZD4 288 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 OR4C11Q6IEV9 310 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 LINC00346Q8IVM7 164 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 SPACA3Q8IXA5 215 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 CSNK2A3Q8NEV1 391 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 OR5H2Q8NGV7 314 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 NKD1Q969G9 470 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 SCN3AQ9NY46 2000 aa10.16□□□□□ -0.78
CCNA1-201ENST00000255465 PTPRQQ9UMZ3 2332 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 TRAV9-2A0A087WT02 112 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 TRBV9A0A0B4J1U6 114 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 FITM1A5D6W6 292 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 G3V3Y1 287 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 CRISP2P16562 243 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 TMEM249Q2WGJ8 235 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 Q6ZVH6 145 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 CDC20BQ86Y33 519 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 PATZ1Q9HBE1 687 aaKnown RBP10.15□□□□□ -0.78
CCNA1-201ENST00000255465 GNG13Q9P2W3 67 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 KLHDC2Q9Y2U9 406 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 CACNA1GO43497 2377 aa10.15□□□□□ -0.78
CCNA1-201ENST00000255465 J3QR89 54 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 NTN1O95631 604 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 HLA-DRB1P01911 266 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 PIGPP57054 158 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 C6orf15Q6UXA7 325 aaPredicted RBP10.15□□□□□ -0.79
CCNA1-201ENST00000255465 RNF44Q7L0R7 432 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 CALHM1Q8IU99 346 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 OR10P1Q8NGE3 313 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 GLIPR2Q9H4G4 154 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 PLEKHF2Q9H8W4 249 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 VDAC3Q9Y277 283 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 TNFRSF18Q9Y5U5 241 aa10.15□□□□□ -0.79
CCNA1-201ENST00000255465 LAMA5O15230 3695 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 DPRXA6NFQ7 191 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 IFNL4K9M1U5 179 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 SERF1AO75920 110 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 HIST1H1CP16403 213 aaKnown RBP10.14□□□□□ -0.79
CCNA1-201ENST00000255465 LHX2P50458 406 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 GPM6AP51674 278 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 HSD52Q0P140 79 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 CD300EQ496F6 205 aaPredicted RBP10.14□□□□□ -0.79
CCNA1-201ENST00000255465 COX19Q49B96 90 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 PHYHD1Q5SRE7 291 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 DCST2Q5T1A1 773 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 STUMQ69YW2 141 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 CCDC144NLQ6NUI1 221 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 GVQW1Q8N7I0 195 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 PFN4Q8NHR9 129 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 SARAFQ96BY9 339 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 ADOQ96SZ5 270 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
CCNA1-201ENST00000255465 C20orf141Q9NUB4 165 aa10.14□□□□□ -0.79
CCNA1-201ENST00000255465 SCN2AQ99250 2005 aa10.13□□□□□ -0.79
CCNA1-201ENST00000255465 KMT2BQ9UMN6 2715 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms