RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 IGF1P05019 195 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 LSAMPQ13449 338 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 SIGIRRQ6IA17 410 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 HSPB9Q9BQS6 159 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 CST11Q9H112 138 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 PLCXD1Q9NUJ7 323 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 PSORS1C1Q9UIG5 152 aa16.5■□□□□ 0.23
NEDD8-201ENST00000250495 ZNF701M0R085 212 aaPredicted RBP16.49■□□□□ 0.23
NEDD8-201ENST00000250495 PDCD6O75340 191 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 HTD2P86397 168 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 CFHR3Q02985 330 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 CNPY1Q3B7I2 92 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 C9orf66Q5T8R8 295 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 ZNF107Q9UII5 783 aaPredicted RBP16.49■□□□□ 0.23
NEDD8-201ENST00000250495 JPT1Q9UK76 154 aa16.49■□□□□ 0.23
NEDD8-201ENST00000250495 YPEL1O60688 119 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 RGS11O94810 467 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 MMDQ15546 238 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 DEFB136Q30KP8 78 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 LY6G6FQ5SQ64 297 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 AHSA2Q719I0 299 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 NANOGP1Q8N7R0 232 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 OR52L2PQ8NGH6 319 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 MRPL30Q8TCC3 161 aaKnown RBP16.48■□□□□ 0.23
NEDD8-201ENST00000250495 FAM46BQ96A09 425 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 KCTD7Q96MP8 289 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 YPEL2Q96QA6 119 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 ABHD14AQ9BUJ0 271 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 ERGIC3Q9Y282 383 aa16.48■□□□□ 0.23
NEDD8-201ENST00000250495 UBBP0CG47 229 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 PSMB8P28062 276 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 LAIR2Q6ISS4 152 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 GPR141Q7Z602 305 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 BPIFB6Q8NFQ5 453 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 C4orf3Q8WVX3 66 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 GALMQ96C23 342 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 NEDD4LQ96PU5 975 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 TSC22D3Q99576 134 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 ZNF251Q9BRH9 671 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 TPRKBQ9Y3C4 175 aa16.47■□□□□ 0.23
NEDD8-201ENST00000250495 SLC2A2P11168 524 aaPredicted RBP16.46■□□□□ 0.23
NEDD8-201ENST00000250495 PPP1CCP36873 323 aaKnown RBP16.46■□□□□ 0.23
NEDD8-201ENST00000250495 ACTBP60709 375 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 GNMTQ14749 295 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 NKAPLQ5M9Q1 402 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 TMEM65Q6PI78 240 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 MS4A15Q8N5U1 240 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 RBMXL1Q96E39 390 aaKnown RBP16.46■□□□□ 0.23
NEDD8-201ENST00000250495 PTTG2Q9NZH5 202 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 CEPT1Q9Y6K0 416 aa16.46■□□□□ 0.23
NEDD8-201ENST00000250495 COL7A1Q02388 2944 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 ACSM3Q53FZ2 586 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 GLT8D1Q68CQ7 371 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 ODF3L1Q8IXM7 274 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 UBE2E2Q96LR5 201 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 WWC2-AS2Q96NR7 200 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 NABP2Q9BQ15 211 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 SCN3BQ9NY72 215 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 ABRACLQ9P1F3 81 aa16.45■□□□□ 0.22
NEDD8-201ENST00000250495 SEC14L6B5MCN3 397 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 NHLRC4P0CG21 123 aaPredicted RBP16.44■□□□□ 0.22
NEDD8-201ENST00000250495 PPIFP30405 207 aaKnown RBP16.44■□□□□ 0.22
NEDD8-201ENST00000250495 LUMP51884 338 aaPredicted RBP16.44■□□□□ 0.22
NEDD8-201ENST00000250495 C5orf24Q7Z6I8 188 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 OR2AK2Q8NG84 335 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 OR11H1Q8NG94 326 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 SULT4A1Q9BR01 284 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 MRPL20Q9BYC9 149 aaKnown RBP16.44■□□□□ 0.22
NEDD8-201ENST00000250495 OR51J1Q9H342 316 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 DUSP21Q9H596 190 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 RSL24D1Q9UHA3 163 aaKnown RBP16.44■□□□□ 0.22
NEDD8-201ENST00000250495 DNAH9Q9NYC9 4486 aa16.44■□□□□ 0.22
NEDD8-201ENST00000250495 NBR2O15453 112 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 HLA-DRB1P01911 266 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 CHATP28329 748 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 FHL3Q13643 280 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 C1orf100Q5SVJ3 147 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 LIN54Q6MZP7 749 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 ZNF833PQ6ZTB9 187 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 SPARTQ8N0X7 666 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 KCNG3Q8TAE7 436 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 MYOZ3Q8TDC0 251 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 PHYHIPQ92561 330 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 RITA1Q96K30 269 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 FAAP24Q9BTP7 215 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 FKBP14Q9NWM8 211 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 KIAA1456Q9P272 454 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 STEAP1Q9UHE8 339 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 WSB1Q9Y6I7 421 aa16.43■□□□□ 0.22
NEDD8-201ENST00000250495 VSIG8P0DPA2 414 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 ECI1P42126 302 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 OR3A3P47888 321 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 RPS27AP62979 156 aaKnown RBP16.42■□□□□ 0.22
NEDD8-201ENST00000250495 HMGN3Q15651 99 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 C5orf64Q2M2E5 130 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 RNLSQ5VYX0 342 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 OR10K2Q6IF99 312 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 ZNF491Q8N8L2 437 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 NPBQ8NG41 125 aa16.42■□□□□ 0.22
NEDD8-201ENST00000250495 CYYR1Q96J86 154 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms