RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 IGKV1-13P0DP09 117 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 TAS2R30P59541 319 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 NUFIP2Q7Z417 695 aaKnown RBP14.45□□□□□ -0.1
FOXA1-201ENST00000250448 OR10D4PQ8NGN7 298 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 FOXB1Q99853 325 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 GPR35Q9HC97 309 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 BSNQ9UPA5 3926 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 PIEZO1Q92508 2521 aa14.45□□□□□ -0.1
FOXA1-201ENST00000250448 SCTP09683 121 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 SPCS3P61009 180 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 HLA-DRB3P79483 266 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 OR13D1Q8NGV5 346 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 A0A096LPE4 126 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 A0A1W2PPZ6 126 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A10PA6NDY2 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A18PA6NE21 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A16PA6NEW6 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A20PA6NIJ5 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A8PA6NJQ4 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A7PA6NKC0 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A22PA8MWA6 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A12PA8MX19 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A5PA8MXJ8 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A23PA8MXZ1 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 ATXN7O15265 892 aaPredicted RBP14.44□□□□□ -0.1
FOXA1-201ENST00000250448 TRGC2P03986 189 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A15PP0C7V4 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A13PP0C7W8 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A14PP0C7W9 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A24PP0C7X0 464 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 NKX6-1P78426 367 aaPredicted RBP14.44□□□□□ -0.1
FOXA1-201ENST00000250448 OR8G1Q15617 311 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 SPACA3Q8IXA5 215 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 ZADH2Q8N4Q0 377 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 WASF3Q9UPY6 502 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 PPP1R2P9O14990 202 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 BCL3P20749 454 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 PAX9P55771 341 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 HERPUD1Q15011 391 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 SRSF7Q16629 238 aaKnown RBP eCLIP14.44□□□□□ -0.1
FOXA1-201ENST00000250448 OR10G4Q8NGN3 311 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 CCL28Q9NRJ3 127 aa14.44□□□□□ -0.1
FOXA1-201ENST00000250448 ELOA3CA0A087WX78 387 aaPredicted RBP14.43□□□□□ -0.1
FOXA1-201ENST00000250448 TUSC2O75896 110 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 NAPSAO96009 420 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 PCBD1P61457 104 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 SSX9Q7RTT3 188 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 MCEMP1Q8IX19 187 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 GCNT2Q8N0V5 402 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 HIST3H2BBQ8N257 126 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 Q8NFD4 153 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 OR5D13Q8NGL4 314 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 TAAR3PQ9P1P4 343 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 RNF115Q9Y4L5 304 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 IGKV3D-15A0A087WSY6 115 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 TRAV1-1A0A0B4J248 108 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 B4DEV8 164 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 DFFBO76075 338 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 SOD3P08294 240 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 IL22RA2Q969J5 263 aa14.43□□□□□ -0.1
FOXA1-201ENST00000250448 GTF3C1Q12789 2109 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 H0Y980 276 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 GFI1BQ5VTD9 330 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 DTD1Q8TEA8 209 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 SPSB4Q96A44 273 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 GPR61Q9BZJ8 451 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 GNG13Q9P2W3 67 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 CD200P41217 278 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 DEFA6Q01524 100 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 FAM90A2PQ658T7 463 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 THNSL2Q86YJ6 484 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 C1orf87Q8N0U7 546 aa14.42□□□□□ -0.1
FOXA1-201ENST00000250448 PDZD11Q5EBL8 140 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 SLC25A24Q6NUK1 477 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 FAM210BQ96KR6 192 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 PRDM13Q9H4Q3 707 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 GFOD1Q9NXC2 390 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 PRSS50Q9UI38 385 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 KIR2DS1A0A191URI9 304 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 TNFSF12O43508 249 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 IFNA5P01569 189 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 KIR2DS4P43632 304 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 RAB11AP62491 216 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 ARF1P84077 181 aaKnown RBP14.41□□□□□ -0.1
FOXA1-201ENST00000250448 KIR2DS1Q14954 304 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 OR2T2Q6IF00 324 aa14.41□□□□□ -0.1
FOXA1-201ENST00000250448 IGKV1-6A0A0C4DH72 117 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 H3BP45 60 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 FGF12P61328 243 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 TMEM267Q0VDI3 215 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 H1FOOQ8IZA3 346 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 NEK7Q8TDX7 302 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 TMEM45BQ96B21 275 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 TRIB1Q96RU8 372 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 C1QTNF5Q9BXJ0 243 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 TLN1Q9Y490 2541 aaKnown RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 A0A0G2JRQ6 117 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 TRGC1P0CF51 173 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 HIST1H1BP16401 226 aaKnown RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 CFAP161Q6P656 301 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms