RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SEC11CQ9BY50 192 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
LRFN1-201ENST00000248668 TIMM8AO60220 97 aaPredicted RBP13.32□□□□□ -0.28
LRFN1-201ENST00000248668 CECR9P0C854 216 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 Q6ZS49 121 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 WDR31Q8NA23 367 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 SARAFQ96BY9 339 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 M0R036 132 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 SLC31A2O15432 143 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 PSPNO60542 156 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 MBP02144 154 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM182Q6ZP80 229 aaPredicted RBP13.32□□□□□ -0.28
LRFN1-201ENST00000248668 FAM185AQ8N0U4 392 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 OR2C3Q8N628 320 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 POLDIP2Q9Y2S7 368 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 BORCS7-ASMTA0A0B4J1R7 106 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 CDS2O95674 445 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM50AO95807 157 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 SERPINE2P07093 398 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 RAC2P15153 192 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 S100A2P29034 98 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 VAMP2P63027 116 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 PYY3Q5JQD4 70 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 TCEAL7Q9BRU2 100 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
LRFN1-201ENST00000248668 COL6A6A6NMZ7 2263 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 CTXN2P0C2S0 81 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 F2RP25116 425 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 P2RY1P47900 373 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 ACSF3Q4G176 576 aaPredicted RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 MIDNQ504T8 468 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 C10orf91Q5T1B1 145 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 INO80CQ6PI98 192 aaPredicted RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 UBAC2Q8NBM4 344 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 BOD1Q96IK1 185 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 AKR1E2Q96JD6 320 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 RIMS4Q9H426 269 aaPredicted RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 METTL1Q9UBP6 276 aaKnown RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 GAPDHP04406 335 aaKnown RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 ARG1P05089 322 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 HEXAP06865 529 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 PGA5P0DJD9 388 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 AESQ08117 197 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
LRFN1-201ENST00000248668 OR10V1Q8NGI7 309 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 TOLLIPQ9H0E2 274 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 GLRX2Q9NS18 164 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 GFOD1Q9NXC2 390 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 AQP7O14520 342 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 CEACAM6P40199 344 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 CAMLGP49069 296 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 SRPXP78539 464 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF561Q8N587 486 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 PLPPR2Q96GM1 343 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
LRFN1-201ENST00000248668 K7EM74 188 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 CHST1O43916 411 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 HAND1O96004 215 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 UCP1P25874 307 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 LINC00596Q86U02 117 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 SAT2Q96F10 170 aaPredicted RBP13.3□□□□□ -0.28
LRFN1-201ENST00000248668 DOCK11Q5JSL3 2073 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 RNASEK-C17orf49H0YIS7 233 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 SH2D1BO14796 132 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 VDAC1P21796 283 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 ERVK11-1P61568 191 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 TESK1Q15569 626 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 NMSQ5H8A3 153 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 FAM76BQ5HYJ3 339 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 VHLLQ6RSH7 139 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 OR1L1Q8NH94 360 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 TMEM171Q8WVE6 324 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 ABHD14AQ9BUJ0 271 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 FAM212BQ9NTI7 297 aaPredicted RBP13.3□□□□□ -0.28
LRFN1-201ENST00000248668 TREM2Q9NZC2 230 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 DKK4Q9UBT3 224 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
LRFN1-201ENST00000248668 A0A087X0M5 115 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 A0A1B0GX30 115 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 IQCF6A8MYZ5 107 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 TSPAN15O95858 294 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 NDUFA6P56556 154 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 LTC4SQ16873 150 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 BTNL8Q6UX41 500 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 IL34Q6ZMJ4 242 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 Q6ZR03 302 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 ZNF808Q8N4W9 903 aaPredicted RBP13.29□□□□□ -0.28
LRFN1-201ENST00000248668 OR5C1Q8NGR4 320 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 FAM213BQ8TBF2 198 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 OR3A1P47881 315 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 RND3P61587 244 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 RUNX1Q01196 453 aa13.29□□□□□ -0.28
LRFN1-201ENST00000248668 RELQ04864 619 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms