RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ID3Q02535 119 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 AESQ08117 197 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 FBXW9Q5XUX1 488 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 COLCA1Q6ZS62 124 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 ZNF709Q8N972 641 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 SCCPDHQ8NBX0 429 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 MRGPRDQ8TDS7 321 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 FER1L6-AS2Q96M78 137 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 TAAR3PQ9P1P4 343 aa10.72□□□□□ -0.69
RAB3IP-201ENST00000247833 FAM157AC9JC47 383 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 G6PCP35575 357 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 SDSLQ96GA7 329 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 LINC00470Q9BZP3 86 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 BTBD17A6NE02 478 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 WNT9BO14905 357 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 ACP1P24666 158 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 ZNF766Q5HY98 468 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 FAM53AQ6NSI3 398 aaPredicted RBP10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 DUSP13Q9UII6 198 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 PKDREJQ9NTG1 2253 aa10.71□□□□□ -0.69
RAB3IP-201ENST00000247833 BDP1A6H8Y1 2624 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 IGKV3D-15A0A087WSY6 115 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 TMEM265A0A087WTH1 108 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 TGIF2-C20orf24A0A0A6YYL0 155 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 HES3Q5TGS1 186 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 OR1L1Q8NH94 360 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 MSL2Q9HCI7 577 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 MIOXQ9UGB7 285 aa10.71□□□□□ -0.7
RAB3IP-201ENST00000247833 SLC38A11Q08AI6 406 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 A0A1B0GU03 582 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 LRP5LA4QPB2 252 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 MAP1LC3B2A6NCE7 125 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 S100PP25815 95 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 SPSB3Q6PJ21 355 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 VHLLQ6RSH7 139 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 PCSK4Q6UW60 755 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 SAXO1Q8IYX7 474 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 OR52L2PQ8NGH6 319 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 MAP1LC3BQ9GZQ8 125 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 CLN8Q9UBY8 286 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 IFNA1P01562 189 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 MMP9P14780 707 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 HOXA6P31267 233 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 EIF2S3P41091 472 aaKnown RBP10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 PRAMEF6Q5VXH4 476 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 ZNF324BQ6AW86 544 aaPredicted RBP10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 S100PBPQ96BU1 408 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 TCEAL7Q9BRU2 100 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 OPA3Q9H6K4 179 aa10.7□□□□□ -0.7
RAB3IP-201ENST00000247833 NBASA2RRP1 2371 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 IL18BPO95998 194 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 ICAM4Q14773 271 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 RNF212Q495C1 297 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 H1FOOQ8IZA3 346 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 LYPD6BQ8NI32 183 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 GALMQ96C23 342 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 OR4C12Q96R67 309 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 TMPRSS5Q9H3S3 457 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 TMEM9BQ9NQ34 198 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 TRBV23-1A0A0A0MS06 115 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 C5orf52A6NGY3 159 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 DAZAP2Q15038 168 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 ZNF880Q6PDB4 577 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 DRAM1Q8N682 238 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 IER2Q9BTL4 223 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 HINT2Q9BX68 163 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 GPR87Q9BY21 358 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 GAB2Q9UQC2 676 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 LINC00587B1AMM8 73 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 SOX15O60248 233 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 HAND1O96004 215 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 SOX8P57073 446 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 MSMO1Q15800 293 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 FGFRL1Q8N441 504 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 ZNF610Q8N9Z0 462 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 GNG12Q9UBI6 72 aa10.69□□□□□ -0.7
RAB3IP-201ENST00000247833 ACACAQ13085 2346 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 TRGC2P03986 189 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 COX5BP10606 129 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 TMEM178AQ8NBL3 297 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 ABHD14BQ96IU4 210 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 CABLES2Q9BTV7 478 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 TOLLIPQ9H0E2 274 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 CLN5O75503 358 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 GCH1P30793 250 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 PLA2G5P39877 138 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 PAX9P55771 341 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 CATR1Q13166 79 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 Q8WTZ3 238 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 OR51I2Q9H344 312 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 MRPS18CQ9Y3D5 142 aaKnown RBP10.68□□□□□ -0.7
RAB3IP-201ENST00000247833 OR5H1A6NKK0 313 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms