RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 DUX4Q9UBX2 424 aa11.76□□□□□ -0.53
SDF2-201ENST00000247020 A0A1W2PPR1 153 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 ADAP1O75689 374 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 CDS2O95674 445 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 OR8U9P0C7N5 309 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 NDUFB7P17568 137 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 COL8A2P25067 703 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 LOXL3P58215 753 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GNMTQ14749 295 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 Q3ZCU0 254 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 MORN2Q502X0 79 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 Q5BKY6 102 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 ZBTB8BQ8NAP8 495 aaPredicted RBP11.75□□□□□ -0.53
SDF2-201ENST00000247020 OR8U1Q8NH10 309 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GON7Q9BXV9 100 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 KCNS2Q9ULS6 477 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 CFAP46Q8IYW2 2715 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 SPTBN1Q01082 2364 aaKnown RBP11.75□□□□□ -0.53
SDF2-201ENST00000247020 TRBV23-1A0A0A0MS06 115 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 C13orf42A0A1B0GVH6 325 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 HOXB5P09067 269 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PET100P0DJ07 73 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 RPA2P15927 270 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PSMB6P28072 239 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PPP1CCP36873 323 aaKnown RBP11.75□□□□□ -0.53
SDF2-201ENST00000247020 RAB7AP51149 207 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 IL15RAQ13261 267 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 SP6Q3SY56 376 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 TMEM155Q4W5P6 130 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GGNBP1Q5YKI7 109 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 C11orf87Q6NUJ2 197 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 ZNF66Q6ZN08 573 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 DRAM1Q8N682 238 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 WDR89Q96FK6 387 aaPredicted RBP11.75□□□□□ -0.53
SDF2-201ENST00000247020 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 SEC22AQ96IW7 307 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PARP12Q9H0J9 701 aaKnown RBP11.75□□□□□ -0.53
SDF2-201ENST00000247020 OR2D2Q9H210 308 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 SLA2Q9H6Q3 261 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 ZFP57Q9NU63 452 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 IDI2-AS1Q9NZ38 188 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 PRR13Q9NZ81 148 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 GNG12Q9UBI6 72 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
SDF2-201ENST00000247020 RELNP78509 3460 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 MPC2O95563 127 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 RPL31P62899 125 aaKnown RBP11.74□□□□□ -0.53
SDF2-201ENST00000247020 TLE4Q04727 773 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 CATR1Q13166 79 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 LGALSLQ3ZCW2 172 aaPredicted RBP11.74□□□□□ -0.53
SDF2-201ENST00000247020 ZNF695Q8IW36 515 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 RFESDQ8TAC1 157 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 RAB1CQ92928 201 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 RBPMSQ93062 196 aaKnown RBP11.74□□□□□ -0.53
SDF2-201ENST00000247020 RAB39BQ96DA2 213 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 OR10C1Q96KK4 312 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 CHODLQ9H9P2 273 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 CTSZQ9UBR2 303 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 LAMP3Q9UQV4 416 aa11.74□□□□□ -0.53
SDF2-201ENST00000247020 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 DVL1O14640 695 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 RGS13O14921 159 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 LYL1P12980 280 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 DAOP14920 347 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 VDAC1P21796 283 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 TMEM33P57088 247 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 EIF4EBP1Q13541 118 aaPredicted RBP11.73□□□□□ -0.53
SDF2-201ENST00000247020 IAH1Q2TAA2 248 aaPredicted RBP11.73□□□□□ -0.53
SDF2-201ENST00000247020 TMEM268Q5VZI3 342 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 LYPD2Q6UXB3 125 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.73□□□□□ -0.53
SDF2-201ENST00000247020 GRPEL2Q8TAA5 225 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
SDF2-201ENST00000247020 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
SDF2-201ENST00000247020 ABCA4P78363 2273 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 CLEC18AA5D8T8 446 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 SERPINE2P07093 398 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 ZNF345Q14585 488 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 LYZL2Q7Z4W2 148 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 SELENOHQ8IZQ5 122 aaKnown RBP11.72□□□□□ -0.53
SDF2-201ENST00000247020 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 CLEC18CQ8NCF0 446 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 ZNF714Q96N38 554 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 PLSCR3Q9NRY6 295 aa11.72□□□□□ -0.53
SDF2-201ENST00000247020 RPUSD1Q9UJJ7 312 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms