RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 CLDN23Q96B33 292 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 STRADBQ9C0K7 418 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 IGHV5-10-1A0A0J9YXX1 117 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 PSMB3P49720 205 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 GNB2P62879 340 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 RIPPLY2Q5TAB7 128 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 AAED1Q7RTV5 226 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 GBGT1Q8N5D6 347 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 OR56B2PQ8NGI1 322 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 ATG101Q9BSB4 218 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 SH2D2AQ9NP31 389 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 ERRFI1Q9UJM3 462 aaPredicted RBP11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 GJE1A6NN92 205 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 HOXA6P31267 233 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 SRP14P37108 136 aaKnown RBP11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 CASP6P55212 293 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 PRDX4Q13162 271 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 TEX38Q6PEX7 206 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 OR10J5Q8NHC4 309 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 CRIM1Q9NZV1 1036 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 IGLV2-14P01704 120 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 CYC1P08574 325 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 GPM6AP51674 278 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 FAM180AQ6UWF9 173 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 MRPL41Q8IXM3 137 aaKnown RBP11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 UBE2L5PA0A1B0GUS4 154 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 LRP5LA4QPB2 252 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 B3GALT5-AS1P59052 145 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 CCL7P80098 99 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 CLEC12BQ2HXU8 276 aa11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 CPEB3Q8NE35 698 aaKnown RBP11.88□□□□□ -0.51
SCNN1A-201ENST00000228916 LOC102723996A0A087X1L8 192 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 SLC38A11Q08AI6 406 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 PRSS8Q16651 343 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 C1orf194Q5T5A4 169 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 ACSM6Q6P461 480 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 OR10V1Q8NGI7 309 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 GPR35Q9HC97 309 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 CACNA1EQ15878 2313 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 TRAPPC2LH3BP13 241 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 GYPAP02724 150 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 COX5BP10606 129 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 CEACAM21Q3KPI0 293 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 ZNF585BQ52M93 769 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 UBE2ZQ9H832 354 aaPredicted RBP11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 MANBALQ9NQG1 85 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 OCIAD1Q9NX40 245 aa11.87□□□□□ -0.51
SCNN1A-201ENST00000228916 NPIPB11E5RHQ5 1161 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 M0R143 59 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 CBR3O75828 277 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 VENTXO95231 258 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 LCN2P80188 198 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TMEM14EPQ6UXP3 125 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 MKXQ8IYA7 352 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 OR1K1Q8NGR3 316 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 CCDC74BQ96LY2 380 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TNRC6BQ9UPQ9 1833 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 LY6G6EA0A0G2JKS1 128 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TMEM210A6NLX4 147 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 RAB4AP20338 218 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 PLA2G5P39877 138 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 CARD18P57730 90 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TLE1Q04724 770 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TESK1Q15569 626 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 LINC00596Q86U02 117 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 GGNQ86UU5 652 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 ZDHHC23Q8IYP9 409 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 SLC25A22Q9H936 323 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 CBLN4Q9NTU7 201 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 U3KQA8 63 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TNRC6AQ8NDV7 1962 aaKnown RBP11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TDGF1P3P51864 188 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 OR4F5Q8NH21 305 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 OR4F4Q96R69 305 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 TMEM9BQ9NQ34 198 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
SCNN1A-201ENST00000228916 IGHV1-45A0A0A0MS14 117 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 DEGS1O15121 323 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 RPL15P61313 204 aaKnown RBP11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 R3HDM4Q96D70 268 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 PPP1R14DQ9NXH3 145 aa11.85□□□□□ -0.51
SCNN1A-201ENST00000228916 OR1A1Q9P1Q5 309 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms