RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 GCSAMQ8N6F7 178 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 OR52L2PQ8NGH6 319 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 OR13A1Q8NGR1 328 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 MEGF10Q96KG7 1140 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 SCRT1Q9BWW7 348 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 SH3BGRL3Q9H299 93 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 KCNS2Q9ULS6 477 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 SPEF1Q9Y4P9 236 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 DMXL2Q8TDJ6 3036 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 CACNA1DQ01668 2161 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 DSCAML1Q8TD84 2053 aa16■□□□□ 0.15
YBX3-201ENST00000228251 FAM157AC9JC47 383 aa16■□□□□ 0.15
YBX3-201ENST00000228251 P0C879 139 aa16■□□□□ 0.15
YBX3-201ENST00000228251 PRDX2P32119 198 aa16■□□□□ 0.15
YBX3-201ENST00000228251 ID4P47928 161 aa16■□□□□ 0.15
YBX3-201ENST00000228251 FAM27E3Q08E93 113 aa16■□□□□ 0.15
YBX3-201ENST00000228251 KRBOX4Q5JUW0 171 aa16■□□□□ 0.15
YBX3-201ENST00000228251 SPACA3Q8IXA5 215 aa16■□□□□ 0.15
YBX3-201ENST00000228251 MRGPRDQ8TDS7 321 aa16■□□□□ 0.15
YBX3-201ENST00000228251 UQCC1Q9NVA1 299 aa16■□□□□ 0.15
YBX3-201ENST00000228251 CACFD1Q9UGQ2 172 aa16■□□□□ 0.15
YBX3-201ENST00000228251 DUSP13Q9UII6 198 aa16■□□□□ 0.15
YBX3-201ENST00000228251 ACACAQ13085 2346 aa16■□□□□ 0.15
YBX3-201ENST00000228251 ATP6V1G2-DDX39BF2Z307 99 aa16■□□□□ 0.15
YBX3-201ENST00000228251 DSCAMO60469 2012 aa16■□□□□ 0.15
YBX3-201ENST00000228251 GABRA2P47869 451 aa16■□□□□ 0.15
YBX3-201ENST00000228251 ASCL1P50553 236 aa16■□□□□ 0.15
YBX3-201ENST00000228251 ZNF273Q14593 569 aa16■□□□□ 0.15
YBX3-201ENST00000228251 IZUMO4Q1ZYL8 232 aa16■□□□□ 0.15
YBX3-201ENST00000228251 CR1LQ2VPA4 569 aa16■□□□□ 0.15
YBX3-201ENST00000228251 SPAG16Q8N0X2 631 aa16■□□□□ 0.15
YBX3-201ENST00000228251 NARS2Q96I59 477 aaKnown RBP16■□□□□ 0.15
YBX3-201ENST00000228251 ZGRF1Q86YA3 2104 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 PLCE1Q9P212 2302 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 A0A0G2JNJ9 132 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 RNF212BA8MTL3 300 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 DNASE2O00115 360 aaPredicted RBP15.99■□□□□ 0.15
YBX3-201ENST00000228251 IL2RGP31785 369 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 GATA4P43694 442 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 RAB5CP51148 216 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 VAMP2P63027 116 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 OR2V2Q96R30 315 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 Q9UFV3 132 aa15.99■□□□□ 0.15
YBX3-201ENST00000228251 RBM7Q9Y580 266 aaKnown RBP15.99■□□□□ 0.15
YBX3-201ENST00000228251 K7N7A8 449 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 EPHA1P21709 976 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 SSTR5P35346 364 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 BRWD1-AS2P59051 145 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 RPL30P62888 115 aaKnown RBP15.98■□□□□ 0.15
YBX3-201ENST00000228251 ZNF266Q14584 549 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 TRAT1Q6PIZ9 186 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 MRGPRGQ86SM5 289 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 RAB40CQ96S21 281 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 OR2D2Q9H210 308 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 CACNG5Q9UF02 275 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 ZNF835Q9Y2P0 537 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 FAM96BQ9Y3D0 163 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 TXNL1O43396 289 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 DYNLT3P51808 116 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 ARHGDIBP52566 201 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 HTD2P86397 168 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 TBR1Q16650 682 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 GUCA2BQ16661 112 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 PUSL1Q8N0Z8 303 aaKnown RBP15.98■□□□□ 0.15
YBX3-201ENST00000228251 TPRX1Q8N7U7 411 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.98■□□□□ 0.15
YBX3-201ENST00000228251 HSD17B11Q8NBQ5 300 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 OR5C1Q8NGR4 320 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 SEC11CQ9BY50 192 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 MRPL37Q9BZE1 423 aaKnown RBP15.98■□□□□ 0.15
YBX3-201ENST00000228251 TMEM231Q9H6L2 316 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 COA4Q9NYJ1 87 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 JKAMPQ9P055 326 aa15.98■□□□□ 0.15
YBX3-201ENST00000228251 STRAPQ9Y3F4 350 aaKnown RBP15.98■□□□□ 0.15
YBX3-201ENST00000228251 LOC105371267A0A1B0GV96 52 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 NXPH3O95157 252 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 CD40P25942 277 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 PPP1CCP36873 323 aaKnown RBP15.97■□□□□ 0.15
YBX3-201ENST00000228251 RPS23P62266 143 aaKnown RBP15.97■□□□□ 0.15
YBX3-201ENST00000228251 DEFA5Q01523 94 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 NHLH1Q02575 133 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 FOXC1Q12948 553 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 CLINT1Q14677 625 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 FAM222BQ8WU58 562 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 C17orf50Q8WW18 174 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 SNX22Q96L94 193 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 AGMATQ9BSE5 352 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 DCTN5Q9BTE1 182 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 NKX6-2Q9C056 277 aaPredicted RBP15.97■□□□□ 0.15
YBX3-201ENST00000228251 WSB1Q9Y6I7 421 aa15.97■□□□□ 0.15
YBX3-201ENST00000228251 PTPRZ1P23471 2315 aaPredicted RBP15.96■□□□□ 0.15
YBX3-201ENST00000228251 C9JQL5 133 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 RNASEK-C17orf49H0YIS7 233 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 K7ENP7 123 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 CST7O76096 145 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 BMP5P22003 454 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 OMGP23515 440 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 ATP6V0CP27449 155 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 FHITP49789 147 aa15.96■□□□□ 0.15
YBX3-201ENST00000228251 SWI5Q1ZZU3 235 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms