RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PCOLCEQ15113 449 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 ZNF799Q96GE5 643 aa12.02□□□□□ -0.48
SF1-201ENST00000227503 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.48
SF1-201ENST00000227503 F2Z2F3 143 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 CRYAAP02489 173 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.49
SF1-201ENST00000227503 PMP22Q01453 160 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 BAXQ07812 192 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 MMDQ15546 238 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 MRGPRGQ86SM5 289 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
SF1-201ENST00000227503 OR10V1Q8NGI7 309 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 ZCCHC14Q8WYQ9 949 aaKnown RBP12.02□□□□□ -0.49
SF1-201ENST00000227503 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 RNF114Q9Y508 228 aa12.02□□□□□ -0.49
SF1-201ENST00000227503 RAB7AP51149 207 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 OR8G2PQ6IF36 304 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 TGIF2LYQ8IUE0 185 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 GPR146Q96CH1 333 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 TMEM56Q96MV1 263 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 UCN2Q96RP3 112 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 TMEM56-RWDD3S4R434 201 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 TRAV34A0A0B4J273 112 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 AQP7O14520 342 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 DHHO43323 396 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 TMEM41BQ5BJD5 291 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 OSR2Q8N2R0 312 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 BORCS8Q96FH0 119 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 PROK2Q9HC23 129 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 OCIAD1Q9NX40 245 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 CACNA1DQ01668 2161 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 ZNF816-ZNF321PA0A0X1KG74 233 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 VDAC1P21796 283 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 EPHA8P29322 1005 aaPredicted RBP12.01□□□□□ -0.49
SF1-201ENST00000227503 CHRNB4P30926 498 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 ZNF468Q5VIY5 522 aaPredicted RBP12.01□□□□□ -0.49
SF1-201ENST00000227503 C10orf35Q96D05 121 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 GPR35Q9HC97 309 aa12.01□□□□□ -0.49
SF1-201ENST00000227503 DOCK7Q96N67 2140 aa12□□□□□ -0.49
SF1-201ENST00000227503 K7ESF4 209 aa12□□□□□ -0.49
SF1-201ENST00000227503 GDF9O60383 454 aa12□□□□□ -0.49
SF1-201ENST00000227503 ZIC3O60481 467 aa12□□□□□ -0.49
SF1-201ENST00000227503 PDGFBP01127 241 aaPredicted RBP12□□□□□ -0.49
SF1-201ENST00000227503 ADMP35318 185 aa12□□□□□ -0.49
SF1-201ENST00000227503 ACOT6Q3I5F7 207 aaPredicted RBP12□□□□□ -0.49
SF1-201ENST00000227503 SPANXN5Q5MJ07 72 aa12□□□□□ -0.49
SF1-201ENST00000227503 PNPLA5Q7Z6Z6 429 aaPredicted RBP12□□□□□ -0.49
SF1-201ENST00000227503 ZNF525Q8N782 197 aa12□□□□□ -0.49
SF1-201ENST00000227503 ZIC4Q8N9L1 334 aa12□□□□□ -0.49
SF1-201ENST00000227503 UBALD1Q8TB05 177 aa12□□□□□ -0.49
SF1-201ENST00000227503 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
SF1-201ENST00000227503 HSPB9Q9BQS6 159 aa12□□□□□ -0.49
SF1-201ENST00000227503 MIEN1Q9BRT3 115 aa12□□□□□ -0.49
SF1-201ENST00000227503 DERL1Q9BUN8 251 aa12□□□□□ -0.49
SF1-201ENST00000227503 USF3Q68DE3 2245 aa12□□□□□ -0.49
SF1-201ENST00000227503 LOC102723996A0A087X1L8 192 aa12□□□□□ -0.49
SF1-201ENST00000227503 SLC22A20A6NK97 555 aa12□□□□□ -0.49
SF1-201ENST00000227503 CCL3P10147 92 aa12□□□□□ -0.49
SF1-201ENST00000227503 PSG2P11465 335 aa12□□□□□ -0.49
SF1-201ENST00000227503 DAZAP2Q15038 168 aaPredicted RBP12□□□□□ -0.49
SF1-201ENST00000227503 OR4C12Q96R67 309 aa12□□□□□ -0.49
SF1-201ENST00000227503 FAM103A1Q9BTL3 118 aaKnown RBP12□□□□□ -0.49
SF1-201ENST00000227503 CACNA1EQ15878 2313 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 NPIPA2E9PIF3 369 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 NPIPA3F8WFD2 350 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 VAMP5O95183 116 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 MALLQ13021 153 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 HLA-BQ31612 363 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 TPTE2P1Q5T6R2 138 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 P2RX4Q99571 388 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 DUSP23Q9BVJ7 150 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 CACNG5Q9UF02 275 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 TP53TG3Q9ULZ0 132 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 M0QZK8 103 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 PAGE4O60829 102 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
SF1-201ENST00000227503 CYC1P08574 325 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 FRMD6-AS1P0C7T7 363 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 LIFP15018 202 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 NPPCP23582 126 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 UBE2G2P60604 165 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 RNF151Q2KHN1 245 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 ACSM6Q6P461 480 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 ERASQ7Z444 233 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 STPG4Q8N801 248 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 TMEM204Q9BSN7 226 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 UBE2ZQ9H832 354 aaPredicted RBP11.99□□□□□ -0.49
SF1-201ENST00000227503 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 RNF150Q9ULK6 438 aa11.99□□□□□ -0.49
SF1-201ENST00000227503 IGHV1-45A0A0A0MS14 117 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 ZNF16P17020 682 aaPredicted RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 CEACAM8P31997 349 aaPredicted RBP11.98□□□□□ -0.49
SF1-201ENST00000227503 RBX1P62877 108 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 RAET1LQ5VY80 246 aa11.98□□□□□ -0.49
SF1-201ENST00000227503 FBXW9Q5XUX1 488 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms