RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
NME3-201ENST00000219302 FBXO7Q9Y3I1 522 aa12.17□□□□□ -0.46
NME3-201ENST00000219302 FAM90A7PA6NKC0 464 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 FAM90A23PA8MXZ1 464 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 YPEL1O60688 119 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 SAP30O75446 220 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 FSTP19883 344 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 FUT3P21217 361 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
NME3-201ENST00000219302 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
NME3-201ENST00000219302 SLURP1P55000 103 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 HTD2P86397 168 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 NDPQ00604 133 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 ZFP1Q6P2D0 407 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 ACSM6Q6P461 480 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 ZNF833PQ6ZTB9 187 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 YPEL2Q96QA6 119 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 ABHD14AQ9BUJ0 271 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 BANF2Q9H503 90 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 JPT1Q9UK76 154 aa12.16□□□□□ -0.46
NME3-201ENST00000219302 TRBV5-7A0A0A0MS05 114 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 LCE6AA0A183 80 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 TRIM64CA6NLI5 447 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 LINC01619G3V211 115 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
NME3-201ENST00000219302 OR3A3P47888 321 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 Q499Y3 187 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 CDH26Q8IXH8 852 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 ZNF485Q8NCK3 441 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 MRPL30Q8TCC3 161 aaKnown RBP12.15□□□□□ -0.46
NME3-201ENST00000219302 PGLYRP3Q96LB9 341 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 Q96M66 194 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 CITED4Q96RK1 184 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 C9orf16Q9BUW7 83 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 SELENOIQ9C0D9 397 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 CLEC2DQ9UHP7 191 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.46
NME3-201ENST00000219302 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 A0A087WW49 117 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 LGALS1P09382 135 aaKnown RBP12.14□□□□□ -0.47
NME3-201ENST00000219302 MGMTP16455 207 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 CX3CL1P78423 397 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 GABPB1Q06547 395 aaPredicted RBP12.14□□□□□ -0.47
NME3-201ENST00000219302 YIF1BQ5BJH7 314 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 C6orf141Q5SZD1 244 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 ZNF660Q6AZW8 331 aaPredicted RBP12.14□□□□□ -0.47
NME3-201ENST00000219302 Q8N1Y9 231 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 JAGN1Q8N5M9 183 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 CASTOR1Q8WTX7 329 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 KCNIP1Q9NZI2 227 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 CKLFQ9UBR5 152 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 DIMT1Q9UNQ2 313 aaKnown RBP12.14□□□□□ -0.47
NME3-201ENST00000219302 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
NME3-201ENST00000219302 SAA2-SAA4A0A096LPE2 208 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 A0A1W2PN81 502 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 A0A1W2PPK0 400 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 FCN1O00602 326 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 MAS1P04201 325 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 SAA2P0DJI9 122 aaPredicted RBP12.13□□□□□ -0.47
NME3-201ENST00000219302 CHRNA7P36544 502 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 OR6Q1Q8NGQ2 317 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 ARPC1AQ92747 370 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 OR14A2Q96R54 314 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 CST11Q9H112 138 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 GHITMQ9H3K2 345 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
NME3-201ENST00000219302 ERGIC3Q9Y282 383 aa12.13□□□□□ -0.47
NME3-201ENST00000219302 PDCD6O75340 191 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 AWAT2Q6E213 333 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 CD200R1LQ6Q8B3 271 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 TCTEX1D1Q8N7M0 179 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 ZFP41Q8N8Y5 198 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 GALMQ96C23 342 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 RHOVQ96L33 236 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 IFI27L2Q9H2X8 130 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 FBXL15Q9H469 300 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 C19orf73Q9NVV2 129 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
NME3-201ENST00000219302 LRRC42Q9Y546 428 aa12.12□□□□□ -0.47
NME3-201ENST00000219302 IRGMA1A4Y4 181 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 A8MZ25 164 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 RRHO14718 337 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 CRTAPO75718 401 aaPredicted RBP12.11□□□□□ -0.47
NME3-201ENST00000219302 RGS11O94810 467 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 BAG2O95816 211 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 HSPB1P04792 205 aaKnown RBP12.11□□□□□ -0.47
NME3-201ENST00000219302 OR8U9P0C7N5 309 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 CT45A6P0DMU7 189 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 CT45A5P0DMU8 189 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 CT45A7P0DMV0 189 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 HMGN3Q15651 99 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
NME3-201ENST00000219302 FAM71F2Q6NXP2 309 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms