RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GZMHP20718 246 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 Q8TCH9 128 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 BSCL2Q96G97 398 aaPredicted RBP24.79■■□□□ 1.56
PABPN1-201ENST00000216727 LINC00052Q96N35 136 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 LPAR3Q9UBY5 353 aa24.79■■□□□ 1.56
PABPN1-201ENST00000216727 IGHV3OR15-7A0A075B7D8 119 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 A0A0G2JRQ6 117 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 ODAMA1E959 279 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 K7N7A8 449 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 ADH4P08319 380 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 OR1S2Q8NGQ3 325 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 SAT2Q96F10 170 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-201ENST00000216727 OR2D2Q9H210 308 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 LYRM2Q9NU23 88 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-201ENST00000216727 CACNA1DQ01668 2161 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 BSPH1Q075Z2 132 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 EIF4EBP1Q13541 118 aaPredicted RBP24.78■■□□□ 1.56
PABPN1-201ENST00000216727 EDDM3AQ14507 147 aa24.78■■□□□ 1.56
PABPN1-201ENST00000216727 BORCS7-ASMTA0A0B4J1R7 106 aa24.77■■□□□ 1.56
PABPN1-201ENST00000216727 EWSR1Q01844 656 aaKnown RBP eCLIP24.77■■□□□ 1.563e-7■□□□□ 8.4
PABPN1-201ENST00000216727 MARC2Q969Z3 335 aa24.77■■□□□ 1.56
PABPN1-201ENST00000216727 NCOR1P1Q9H4R4 102 aa24.77■■□□□ 1.56
PABPN1-201ENST00000216727 SSSCA1O60232 199 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 PPP1CCP36873 323 aaKnown RBP24.76■■□□□ 1.55
PABPN1-201ENST00000216727 NHLH2Q02577 135 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 CLEC9AQ6UXN8 241 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 WFDC1Q9HC57 220 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 RNF115Q9Y4L5 304 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 ADIPOQQ15848 244 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 SMIM8Q96KF7 97 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 DIRC2Q96SL1 478 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 SLC25A31Q9H0C2 315 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 MAGT1Q9H0U3 335 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 RNF150Q9ULK6 438 aa24.76■■□□□ 1.55
PABPN1-201ENST00000216727 RAB19A4D1S5 217 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 LGALS8O00214 317 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 ZNF16P17020 682 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-201ENST00000216727 SULT1A2P50226 295 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 VAMP2P63027 116 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 FAM53AQ6NSI3 398 aaPredicted RBP24.75■■□□□ 1.55
PABPN1-201ENST00000216727 FAM216AQ8WUB2 273 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 DCTN5Q9BTE1 182 aa24.75■■□□□ 1.55
PABPN1-201ENST00000216727 ZNF705EA8MWA4 302 aaPredicted RBP24.74■■□□□ 1.55
PABPN1-201ENST00000216727 NUDT19A8MXV4 375 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 IGKV1-5P01602 117 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 ZNF561Q8N587 486 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 ZNRF1Q8ND25 227 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 RNASE11Q8TAA1 199 aaKnown RBP24.74■■□□□ 1.55
PABPN1-201ENST00000216727 FAM24AA6NFZ4 105 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 KIAA1324LA8MWY0 1029 aaPredicted RBP24.74■■□□□ 1.55
PABPN1-201ENST00000216727 CAV2P51636 162 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 UQCC3Q6UW78 93 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 RFESDQ8TAC1 157 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 SDSLQ96GA7 329 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 C5orf30Q96GV9 206 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 GINS3Q9BRX5 216 aa24.74■■□□□ 1.55
PABPN1-201ENST00000216727 CD55P08174 381 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 OR4A8P0C604 315 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 EPHA1P21709 976 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 CD80P33681 288 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 Q6ZRM9 215 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 TMEM252Q8N6L7 170 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 NGBQ9NPG2 151 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 FAM212BQ9NTI7 297 aaPredicted RBP24.73■■□□□ 1.55
PABPN1-201ENST00000216727 NUP50Q9UKX7 468 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 PCNX1Q96RV3 2341 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 IGSF23A1L1A6 192 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 WRBO00258 174 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 CHST1O43916 411 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 IGF2RP11717 2491 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 AKR1C2P52895 323 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 CATR1Q13166 79 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 STUMQ69YW2 141 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 TCTEX1D1Q8N7M0 179 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 JPT1Q9UK76 154 aa24.73■■□□□ 1.55
PABPN1-201ENST00000216727 FBXO24O75426 580 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 TMEM50AO95807 157 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 SEC11BP0C7V7 166 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 TUSC1Q2TAM9 212 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 WFIKKN1Q96NZ8 548 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 AGMATQ9BSE5 352 aa24.72■■□□□ 1.55
PABPN1-201ENST00000216727 TRGV8A0A0C4DH27 118 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 BAXQ07812 192 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 KLRB1Q12918 225 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 MST1LQ2TV78 715 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 FAM201AQ5SY85 155 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 EDARADDQ8WWZ3 215 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 C14orf79Q96F83 325 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 OR6C3Q9NZP0 311 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 CACNG5Q9UF02 275 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 ICE1Q9Y2F5 2266 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 CASP6P55212 293 aa24.71■■□□□ 1.55
PABPN1-201ENST00000216727 IGHV3-43A0A0B4J1X8 118 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 C17orf100A8MU93 164 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 IGHV3-43DP0DP04 118 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 TNFRSF1AP19438 455 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 RAB40CQ96S21 281 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 MMP26Q9NRE1 261 aa24.7■■□□□ 1.54
PABPN1-201ENST00000216727 F2RL2O00254 374 aa24.69■■□□□ 1.54
PABPN1-201ENST00000216727 CYB5R3P00387 301 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms