RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SLC2A8Q9NY64 477 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 VSIG4Q9Y279 399 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 LSM2Q9Y333 95 aaKnown RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 KPTNQ9Y664 436 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 ZNF716A6NP11 495 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 PLPP2O43688 288 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 HBZP02008 142 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 FUT5Q11128 374 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 NCR3LG1Q68D85 454 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 BCL2L2Q92843 193 aaPredicted RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 CRIM1Q9NZV1 1036 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 TRAV34A0A0B4J273 112 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 MMP15P51511 669 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 HMGA2P52926 109 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 DSCR9P59020 149 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 ZNF154Q13106 437 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 LAMTOR1Q6IAA8 161 aa11.8□□□□□ -0.52
SIX4-201ENST00000216513 GNPNAT1Q96EK6 184 aaPredicted RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 SIRT4Q9Y6E7 314 aaPredicted RBP11.8□□□□□ -0.52
SIX4-201ENST00000216513 CEP250Q9BV73 2442 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 SRD5A1P18405 259 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 C11orf87Q6NUJ2 197 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 ZNF561Q8N587 486 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 GCSAMQ8N6F7 178 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 ZNRF1Q8ND25 227 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 LFNGQ8NES3 379 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 RHOFQ9HBH0 211 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 GGNBP1Q5YKI7 109 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 C20orf204Q6ZNR8 217 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 LINC00596Q86U02 117 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 TMEM229BQ8NBD8 167 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 CABLES2Q9BTV7 478 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 CCL28Q9NRJ3 127 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 INTS1Q8N201 2190 aaKnown RBP11.79□□□□□ -0.52
SIX4-201ENST00000216513 B3GALNT1O75752 331 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 TBC1D26Q86UD7 250 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 FAM186AA6NE01 2351 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 C1orf162Q8NEQ5 155 aaPredicted RBP11.79□□□□□ -0.52
SIX4-201ENST00000216513 TMEM37Q8WXS4 190 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 TMEM45BQ96B21 275 aa11.79□□□□□ -0.52
SIX4-201ENST00000216513 MARS2Q96GW9 593 aaKnown RBP11.79□□□□□ -0.52
SIX4-201ENST00000216513 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 CD37P11049 281 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 FAM106AQ4KMX7 169 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 SIGLECL1Q8N7X8 197 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 PRSS27Q9BQR3 290 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 RASL12Q9NYN1 266 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 WASHC3Q9Y3C0 194 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 ZNF318Q5VUA4 2279 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 TTRP02766 147 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 MDKP21741 143 aaPredicted RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 DYNLT3P51808 116 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 ATP5G2Q06055 141 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 COMMD1Q8N668 190 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 ELOVL1Q9BW60 279 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 C17orf100A8MU93 164 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 PTP4A3O75365 173 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 VDAC2P45880 294 aaPredicted RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 PLAURQ03405 335 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 EBLN2Q6P2I7 272 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 TUBD1Q9UJT1 453 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 RPL36A-HNRNPH2H7BZ11 118 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 SS18L1O75177 396 aaPredicted RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 WISP3O95389 354 aaPredicted RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 RBM11P57052 281 aaKnown RBP11.78□□□□□ -0.52
SIX4-201ENST00000216513 HCP5Q6MZN7 132 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 TEX261Q6UWH6 196 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 GAPTQ8N292 157 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 U3KQ87 197 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 RNF223E7ERA6 249 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 WNT9BO14905 357 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 Q5PR19 223 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 BAP18Q8IXM2 172 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 OR1L8Q8NGR8 309 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 TMEM54Q969K7 222 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
SIX4-201ENST00000216513 C1QL1O75973 258 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 SPP1P10451 314 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 PTTG1IPP53801 180 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 OR51B2Q9Y5P1 312 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 TAAR5O14804 337 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 CSN3P07498 182 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 G0S2P27469 103 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 RPL27AP46776 148 aaKnown RBP11.77□□□□□ -0.52
SIX4-201ENST00000216513 SOSTQ9BQB4 213 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 CYB5R1Q9UHQ9 305 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 PRNDQ9UKY0 176 aa11.77□□□□□ -0.52
SIX4-201ENST00000216513 ZNF137PP52743 207 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 STXBP6Q8NFX7 210 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 ATP5SQ99766 215 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms