RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CKLFQ9UBR5 152 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 DNAH9Q9NYC9 4486 aa11.88□□□□□ -0.51
UPK3A-201ENST00000216211 FAM25AB3EWG3 89 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 FAM25CB3EWG5 89 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 FAM25GB3EWG6 89 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 IGKV1D-33P01593 117 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 IGKV1-33P01594 117 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 MAS1P04201 325 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 EIF4EP06730 217 aaKnown RBP11.87□□□□□ -0.51
UPK3A-201ENST00000216211 SNRPBP14678 240 aaKnown RBP11.87□□□□□ -0.51
UPK3A-201ENST00000216211 KCNJ3P48549 501 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 RAB7AP51149 207 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 KRTAP10-11P60412 298 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 PAX5Q02548 391 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 HES5Q5TA89 166 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 SNX29P2Q8IUI4 249 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 SAMD12Q8N8I0 201 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 LINC00482Q8N8I6 264 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 OR10A7Q8NGE5 316 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 OR5H6Q8NGV6 325 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 OR10X1Q8NGY0 326 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
UPK3A-201ENST00000216211 LINC00527Q9UJ94 153 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 ETV7Q9Y603 341 aa11.87□□□□□ -0.51
UPK3A-201ENST00000216211 A0A1B0GVG6 124 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 OR7C1O76099 320 aaPredicted RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 CSTBP04080 98 aaKnown RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 SERPINA2P20848 420 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 HOXD3P31249 432 aaPredicted RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 RBM11P57052 281 aaKnown RBP11.86□□□□□ -0.51
UPK3A-201ENST00000216211 OXA1LQ15070 435 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 UBE2NLQ5JXB2 153 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 C18orf65Q6ZTR6 163 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 UBALD1Q8TB05 177 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 IFT22Q9H7X7 185 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 IL36GQ9NZH8 169 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 EXTL2Q9UBQ6 330 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 STEAP1Q9UHE8 339 aa11.86□□□□□ -0.51
UPK3A-201ENST00000216211 A0A0B4J203 849 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 SERPINE3A8MV23 424 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 HSD17B6O14756 317 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 FGF16O43320 207 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 DUS4LO95620 317 aaKnown RBP11.85□□□□□ -0.51
UPK3A-201ENST00000216211 BDKRB2P30411 391 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 TALDO1P37837 337 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 REG1BP48304 166 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 RPL23AP62750 156 aaKnown RBP11.85□□□□□ -0.51
UPK3A-201ENST00000216211 PYDC2Q56P42 97 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 DEFB121Q5J5C9 76 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 NHLRC3Q5JS37 347 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 ATAD3CQ5T2N8 411 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 GLT8D1Q68CQ7 371 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 FAM53AQ6NSI3 398 aaPredicted RBP11.85□□□□□ -0.51
UPK3A-201ENST00000216211 MOB3BQ86TA1 216 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 MRPL41Q8IXM3 137 aaKnown RBP11.85□□□□□ -0.51
UPK3A-201ENST00000216211 CENPSQ8N2Z9 138 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 LGALS14Q8TCE9 139 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 CCDC107Q8WV48 283 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 S100A13Q99584 98 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 TMEM138Q9NPI0 162 aa11.85□□□□□ -0.51
UPK3A-201ENST00000216211 IGHV3-43A0A0B4J1X8 118 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 IGHV3-72A0A0B4J1Y9 119 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 IGHV1-3A0A0C4DH29 117 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 A0A1W2PP11 408 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 SLC17A2O00624 439 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 IGHV3-43DP0DP04 118 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 IL7P13232 177 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 GZMHP20718 246 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 THBS3P49746 956 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 DEFA1P59665 94 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 DEFA3P59666 94 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 ZNF816Q0VGE8 651 aaPredicted RBP11.84□□□□□ -0.51
UPK3A-201ENST00000216211 IL18Q14116 193 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 P2RY14Q15391 338 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 BAK1Q16611 211 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 PYHIN1Q6K0P9 492 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 C8orf86Q6ZUL3 223 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 OR2W3Q7Z3T1 314 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 SLC35E3Q7Z769 313 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 LINC00596Q86U02 117 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 LYPD6Q86Y78 171 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 NKAIN3Q8N8D7 197 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 SETD6Q8TBK2 473 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 NEK7Q8TDX7 302 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 ABCG5Q9H222 651 aa11.84□□□□□ -0.51
UPK3A-201ENST00000216211 LINC01548A6NM66 108 aa11.83□□□□□ -0.52
UPK3A-201ENST00000216211 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
UPK3A-201ENST00000216211 C15orf65H3BRN8 121 aa11.83□□□□□ -0.52
UPK3A-201ENST00000216211 SDCBPO00560 298 aaPredicted RBP11.83□□□□□ -0.52
UPK3A-201ENST00000216211 TPPPO94811 219 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms