RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 EDARADDQ8WWZ3 215 aa13.12□□□□□ -0.31
SNRPD3-201ENST00000215829 CCL28Q9NRJ3 127 aa13.12□□□□□ -0.31
SNRPD3-201ENST00000215829 SLC2A9Q9NRM0 540 aa13.12□□□□□ -0.31
SNRPD3-201ENST00000215829 GCN1Q92616 2671 aaKnown RBP13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 LOC105371242A0A075B767 164 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 HSD17B6O14756 317 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 NFYBP25208 207 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 ERVFRD-1P60508 538 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 LYG2Q86SG7 212 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 FAM216AQ8WUB2 273 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 CENPEQ02224 2701 aa13.11□□□□□ -0.31
SNRPD3-201ENST00000215829 PTPN13Q12923 2485 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 CRYM-AS1A6NIL9 109 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 C17orf98A8MV24 154 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 C22orf46C9J442 243 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 ITGB1BP1O14713 200 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 IGLV2-14P01704 120 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 RND3P61587 244 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 RRAS2P62070 204 aaPredicted RBP13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 SUPT4H1P63272 117 aaKnown RBP13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 CMTM1Q8IZ96 169 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 C11orf42Q8N5U0 333 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 CCDC71LQ8N9Z2 235 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 BVESQ8NE79 360 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 AKR1E2Q96JD6 320 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 AGMATQ9BSE5 352 aa13.1□□□□□ -0.31
SNRPD3-201ENST00000215829 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 KIAA1324LA8MWY0 1029 aaPredicted RBP13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 SSNA1O43805 119 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 SFT2D2O95562 160 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 LIPFP07098 398 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 TRAPPC2P0DI81 140 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 TRAPPC2BP0DI82 140 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 VAMP1P23763 118 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 ZNF134P52741 427 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 DEFB113Q30KQ7 82 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 UTF1Q5T230 341 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 LRRC75A-AS1Q8N1F1 130 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 OR2AK2Q8NG84 335 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 RAB39BQ96DA2 213 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 MED28Q9H204 178 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 RNF150Q9ULK6 438 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 NBPF19A0A087WUL8 3843 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 TEX13DA0A0J9YY54 714 aaPredicted RBP13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 PFDN1O60925 122 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 IGHV3-7P01780 117 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 ZFP36P26651 326 aaKnown RBP13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 CLEC12BQ2HXU8 276 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 ZNF645Q8N7E2 425 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 LEAP2Q969E1 77 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 OR2D2Q9H210 308 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 KCNS2Q9ULS6 477 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
SNRPD3-201ENST00000215829 IGHV4-61A0A0C4DH41 118 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 A8MXK9 166 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 MPPED1O15442 326 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 SLC22A5O76082 557 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 DUS4LO95620 317 aaKnown RBP13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 RBP4P02753 201 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 IGHV1-8P0DP01 117 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 S100GP29377 79 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 MSMO1Q15800 293 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 CT45A1Q5HYN5 189 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 C11orf88Q6PI97 169 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 ZBTB34Q8NCN2 500 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 ZNF439Q8NDP4 499 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 CT45A3Q8NHU0 189 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 MITD1Q8WV92 249 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 DMRTB1Q96MA1 342 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 NAA60Q9H7X0 242 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 KCNIP3Q9Y2W7 256 aa13.08□□□□□ -0.32
SNRPD3-201ENST00000215829 PGLYRP1O75594 196 aaPredicted RBP13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 RAB7AP51149 207 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 FCN2Q15485 313 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 SLC9A3R2Q15599 337 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 Q3ZCU0 254 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 TBC1D26Q86UD7 250 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 DRAM1Q8N682 238 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 CASTOR1Q8WTX7 329 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 GALNT14Q96FL9 552 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 NEURL2Q9BR09 285 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 ABHD14AQ9BUJ0 271 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 A0A087X0M5 115 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 A0A1B0GX30 115 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 hCG_1809904A0A1W2PP81 198 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 A0A1W2PPE2 198 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 A0A1W2PR64 198 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 A0A1W2PRV1 198 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 SLC31A2O15432 143 aa13.07□□□□□ -0.32
SNRPD3-201ENST00000215829 IFNA2P01563 188 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms