RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 FUT5Q11128 374 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 FXYD3Q14802 87 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST2H2BEQ16778 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 CXorf66Q5JRM2 361 aaPredicted RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 ZNF841Q6ZN19 808 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 LYG1Q8N1E2 194 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 MBD3L1Q8WWY6 194 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BHQ93079 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 OR8B2Q96RD0 313 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 CDX2Q99626 313 aaPredicted RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 SIGMAR1Q99720 223 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BNQ99877 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BMQ99879 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 SERGEFQ9UGK8 458 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 USP54Q70EL1 1684 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 TAF1P21675 1872 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 DSPPQ9NZW4 1301 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 DOCK1Q14185 1865 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 A0A1B0GWB2 263 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 A1L4Q6 167 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 GCM2O75603 506 aaPredicted RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 SRD5A2P31213 254 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 KIR2DS2P43631 304 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 NUDT16L1Q9BRJ7 211 aaKnown RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 IGHV5-51A0A0C4DH38 117 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 MSGN1A6NI15 193 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 LYZP61626 148 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 DOLPP1Q86YN1 238 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 POC1AQ8NBT0 407 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 OR52M1Q8NGK5 317 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 C5orf66Q9H5L9 145 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 WNT5AP41221 380 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 PIGYQ3MUY2 71 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 TEPPQ6URK8 271 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 C1orf210Q8IVY1 113 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 OR10D3Q8NH80 312 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 ASB10Q8WXI3 467 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 ZNF764Q96H86 408 aaPredicted RBP9.09□□□□□ -0.95
VCL-201ENST00000211998 SMIM8Q96KF7 97 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 CHST5Q9GZS9 411 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 FAM206AQ9NX38 181 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 NPTNQ9Y639 398 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 ARAP2Q8WZ64 1704 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 TRBV5-5A0A0J9YX44 114 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SPRY3O43610 288 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 ISXQ2M1V0 245 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 ZNF502Q8TBZ5 544 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 MRGPRDQ8TDS7 321 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 WDYHV1Q96HA8 205 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SFRP2Q96HF1 295 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 COX14Q96I36 57 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 TXNDC17Q9BRA2 123 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SHISA3A0PJX4 238 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 A8MWL6 223 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
VCL-201ENST00000211998 CD1BP29016 333 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 P2RY6Q15077 328 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SNAI3Q3KNW1 292 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.09□□□□□ -0.95
VCL-201ENST00000211998 GTF3AQ92664 365 aaKnown RBP9.09□□□□□ -0.95
VCL-201ENST00000211998 SARGQ9BW04 601 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 GLRX2Q9NS18 164 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 PLA2G3Q9NZ20 509 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 JKAMPQ9P055 326 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 RNF222A6NCQ9 220 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 COLCA2A8K830 154 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 PIN1P1O15428 100 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 TNFSF14O43557 240 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SNAI2O43623 268 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 CT62P0C5K7 136 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 LIMS1P48059 325 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 SPEM2Q0P670 501 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 BHLHA9Q7RTU4 235 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 MMD2Q8IY49 270 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 LINC01555Q8NAE3 123 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 OR2Z1Q8NG97 314 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 OR1N2Q8NGR9 330 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 OR4X1Q8NH49 305 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 AQP3Q92482 292 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 TAF15Q92804 592 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCL-201ENST00000211998 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
VCL-201ENST00000211998 PAPPAQ13219 1627 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 ZNF708P17019 499 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 ZNF32P17041 273 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 MAS1LP35410 378 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 C10orf113Q5VZT2 155 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 PQLC2Q6ZP29 291 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 YBX2Q9Y2T7 364 aaKnown RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 TMSB15BA0A087X1C1 80 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 SH2D7A6NKC9 451 aaPredicted RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 HOXB3P14651 431 aaPredicted RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 LSM10Q969L4 123 aaKnown RBP9.08□□□□□ -0.96
VCL-201ENST00000211998 HIST1H2BLQ99880 126 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 TRAV14DV4A0A0A6YYC5 116 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 ORM1P02763 201 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 PPP1CAP62136 330 aa9.08□□□□□ -0.96
VCL-201ENST00000211998 RTP5Q14D33 572 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms