RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 PTRH2Q9Y3E5 179 aaKnown RBP17.12■□□□□ 0.33
PPP1R3F-201ENST00000055335 HRASP01112 189 aa17.12■□□□□ 0.33
PPP1R3F-201ENST00000055335 DAZAP2Q15038 168 aaPredicted RBP17.12■□□□□ 0.33
PPP1R3F-201ENST00000055335 OR10G4Q8NGN3 311 aa17.12■□□□□ 0.33
PPP1R3F-201ENST00000055335 TRAPPC1Q9Y5R8 145 aa17.12■□□□□ 0.33
PPP1R3F-201ENST00000055335 DNAJC13O75165 2243 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 KNTC1P50748 2209 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 C2CD4DB7Z1M9 353 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 KRASP01116 189 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 SRYQ05066 204 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 SP5Q6BEB4 398 aaPredicted RBP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 TCF23Q7RTU1 214 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 TAF15Q92804 592 aaKnown RBP eCLIP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 TBX15Q96SF7 602 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 MTCH1Q9NZJ7 389 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 ZIC3O60481 467 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 TOMM20LQ6UXN7 152 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 C5orf49A4QMS7 147 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 CNN1P51911 297 aaKnown RBP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 MRPL21Q7Z2W9 205 aaKnown RBP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 RNASEH2CQ8TDP1 164 aaKnown RBP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 MBD3L1Q8WWY6 194 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 P2RX4Q99571 388 aa17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 WDR61Q9GZS3 305 aaKnown RBP17.11■□□□□ 0.33
PPP1R3F-201ENST00000055335 ASCL4Q6XD76 172 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 OR10G9Q8NGN4 311 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 OR10G7Q8NGN6 311 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 ABHD3Q8WU67 409 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 OR2W1Q9Y3N9 320 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 NUPR1O60356 82 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 LRRC75BQ2VPJ9 315 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 DNLZQ5SXM8 178 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 ACSM6Q6P461 480 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 FADS6Q8N9I5 356 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 RBM14Q96PK6 669 aaKnown RBP17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 FSCN3Q9NQT6 498 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 PAM16Q9Y3D7 125 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 ATP23Q9Y6H3 246 aa17.1■□□□□ 0.33
PPP1R3F-201ENST00000055335 LOC102725191A0A1B0GVB3 256 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 NXPH1P58417 271 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 CPEB3Q8NE35 698 aaKnown RBP17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 TMEM170AQ8WVE7 144 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 C19orf25Q9UFG5 118 aaPredicted RBP17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 DOCK10Q96BY6 2186 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 RAB4BP61018 213 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 RABEPKQ7Z6M1 372 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 VASH2Q86V25 355 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 CLN8Q9UBY8 286 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 KIAA1324LA8MWY0 1029 aaPredicted RBP17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 B4E171 279 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 IGKV1-39P01597 117 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 IGKV1D-39P04432 117 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 TSPAN7P41732 249 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 FFAR4Q5NUL3 377 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 TMEM42Q69YG0 159 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 DBX2Q6ZNG2 339 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 BEND2Q8NDZ0 799 aa17.09■□□□□ 0.33
PPP1R3F-201ENST00000055335 IGLV3-32A0A0A0MS00 114 aa17.08■□□□□ 0.33
PPP1R3F-201ENST00000055335 OR6C6A6NF89 314 aa17.08■□□□□ 0.33
PPP1R3F-201ENST00000055335 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.33
PPP1R3F-201ENST00000055335 ATG2AQ2TAZ0 1938 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 LIFP15018 202 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 ERVFC1-1P60608 527 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZNF816Q0VGE8 651 aaPredicted RBP17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 TDRG1Q3Y452 100 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 GUSBP11Q6P575 273 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZNF808Q8N4W9 903 aaPredicted RBP17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 NAPSAO96009 420 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 IGKV1-5P01602 117 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 GCH1P30793 250 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 MPLP40238 635 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 SERF2P84101 59 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 NAGKQ9UJ70 344 aa17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 POLR3KQ9Y2Y1 108 aaPredicted RBP17.08■□□□□ 0.32
PPP1R3F-201ENST00000055335 KCNIP4Q6PIL6 250 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 MCEMP1Q8IX19 187 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 ACY3Q96HD9 319 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 OR6C3Q9NZP0 311 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 SIRPB1O00241 398 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 NPSP0C0P6 89 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 DSCR4P56555 118 aaPredicted RBP17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 CLDN15P56746 228 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 PINX1Q96BK5 328 aaKnown RBP17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 DERL1Q9BUN8 251 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZNF552Q9H707 407 aaPredicted RBP17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 SEMA5BQ9P283 1151 aa17.07■□□□□ 0.32
PPP1R3F-201ENST00000055335 NGFP01138 241 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 ACOT6Q3I5F7 207 aaPredicted RBP17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 WIPI1Q5MNZ9 446 aaPredicted RBP17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 PCSK4Q6UW60 755 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZNF709Q8N972 641 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 IMMP2LQ96T52 175 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 PARD6AQ9NPB6 346 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 A0A0G2JMM0 328 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 A0A1W2PPB8 328 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 DUXBA0A1W2PPF3 345 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 A0A1W2PRS3 328 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 KIR3DP1A8MWS1 328 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 IL3RAP26951 378 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 FGF12P61328 243 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms