RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 CEACAM6P40199 344 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 AP3S2P59780 193 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 CDK10Q15131 360 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 LTC4SQ16873 150 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 NCR3LG1Q68D85 454 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 TOMM5Q8N4H5 51 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 GNG12Q9UBI6 72 aa10.07□□□□□ -0.8
LINC00339-213ENST00000642137 IGHV3-43A0A0B4J1X8 118 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 BET1O15155 118 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 HSPA12AO43301 675 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 AVPP01185 164 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 PMP2P02689 132 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 CD3DP04234 171 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 OR5H8P0DN80 308 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 IGHV3-43DP0DP04 118 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 RFX2P48378 723 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 UBE2E1P51965 193 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 PRRX1P54821 245 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 DYRK1AQ13627 763 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 TRIQKQ629K1 86 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 STEAP1BQ6NZ63 245 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF782Q6ZMW2 699 aaPredicted RBP10.06□□□□□ -0.8
LINC00339-213ENST00000642137 ABHD12Q8N2K0 398 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 C8orf31Q8N9H6 132 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 OR9G1Q8NH87 305 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 GIMAP1Q8WWP7 306 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 SIRT7Q9NRC8 400 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 TMEM160Q9NX00 188 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 SLC23A1Q9UHI7 598 aa10.06□□□□□ -0.8
LINC00339-213ENST00000642137 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 IGHV2-26A0A0B4J1V2 119 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 CENPVL3A0A0U1RRI6 287 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 A8MV72 311 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 J3QR06 171 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 J3QRK9 145 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 RAB3DO95716 219 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 LY6G6DO95868 133 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 IL7P13232 177 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 HRH1P35367 487 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 INPP1P49441 399 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 BPIFB3P59826 476 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 KLF9Q13886 244 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 MEF2DQ14814 521 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 RNASE10Q5GAN6 216 aaKnown RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 H1FOOQ8IZA3 346 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-213ENST00000642137 PNKDQ8N490 385 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 EHFQ9NZC4 300 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 PSG11Q9UQ72 335 aa10.05□□□□□ -0.8
LINC00339-213ENST00000642137 AKAP9Q99996 3911 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 RNASEK-C17orf49H0YIS7 233 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 TOR1AO14656 332 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 TUSC2O75896 110 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 IFNA6P05013 189 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 FCGR2CP31995 323 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 PPP1CCP36873 323 aaKnown RBP10.04□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF134P52741 427 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 DLX1P56177 255 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 TSPAN5P62079 268 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 GNMTQ14749 295 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 UTF1Q5T230 341 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-213ENST00000642137 FAM53AQ6NSI3 398 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-213ENST00000642137 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 ZNF439Q8NDP4 499 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 BEND2Q8NDZ0 799 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 OR6F1Q8NGZ6 308 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 NANPQ8TBE9 248 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 LHX4Q969G2 390 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 TINAGL1Q9GZM7 467 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-213ENST00000642137 C11orf54Q9H0W9 315 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-213ENST00000642137 GHITMQ9H3K2 345 aa10.04□□□□□ -0.8
LINC00339-213ENST00000642137 RDH8Q9NYR8 311 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms