RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 CACNA1DQ01668 2161 aa13.77□□□□□ -0.21
PHGDH-216ENST00000641375 HEXAP06865 529 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 PSMB6P28072 239 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 SRPXP78539 464 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 LIAT1Q6ZQX7 453 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 C2orf50Q96LR7 162 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 EGLN1Q9GZT9 426 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 DNTTIP1Q9H147 329 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 DYSFO75923 2080 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 COL6A6A6NMZ7 2263 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 MGST3O14880 152 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 PHF1O43189 567 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-216ENST00000641375 APOBEC3AP31941 199 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-216ENST00000641375 LUMP51884 338 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-216ENST00000641375 SP6Q3SY56 376 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 BEX5Q5H9J7 111 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 LGI3Q8N145 548 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 OR10V1Q8NGI7 309 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 GLYATL2Q8WU03 294 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 LURAP1Q96LR2 239 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 OR1A1Q9P1Q5 309 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 PKD1L2Q7Z442 2459 aa13.76□□□□□ -0.21
PHGDH-216ENST00000641375 IGHV3OR15-7A0A075B7D8 119 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 NBASA2RRP1 2371 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 LRRC30A6NM36 301 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MPTX1A8MV57 137 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 E7EQL1 145 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 TFF1P04155 84 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 S100A6P06703 90 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 FGF2P09038 288 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 S100A11P31949 105 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 CCL8P80075 99 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 SNTB1Q13884 538 aaKnown RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 TBC1D26Q86UD7 250 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF561Q8N587 486 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MSI2Q96DH6 328 aaKnown RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 OR10C1Q96KK4 312 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MS4A7Q9GZW8 240 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MFFQ9GZY8 342 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MS4A5Q9H3V2 200 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 CCL28Q9NRJ3 127 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 COA4Q9NYJ1 87 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 PFDN2Q9UHV9 154 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 TPRP12270 2363 aaKnown RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 DNASE2O00115 360 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 HSD17B6O14756 317 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 MUC1P15941 1255 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 IL2RGP31785 369 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 CEACAM6P40199 344 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 GLIPR1P48060 266 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 OPCMLQ14982 345 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 HSD17B13Q7Z5P4 300 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 EIF4E3Q8N5X7 224 aaKnown RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 BVESQ8NE79 360 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 OR5D13Q8NGL4 314 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 SAP30LQ9HAJ7 183 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 RNF115Q9Y4L5 304 aa13.75□□□□□ -0.21
PHGDH-216ENST00000641375 DIDO1Q9BTC0 2240 aaKnown RBP13.75□□□□□ -0.21
PHGDH-216ENST00000641375 K7N7A8 449 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 PET100P0DJ07 73 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 GRNP28799 593 aaKnown RBP13.74□□□□□ -0.21
PHGDH-216ENST00000641375 EFNB3Q15768 340 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 MRGPRDQ8TDS7 321 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 NINJ1Q92982 152 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 TP53RKQ96S44 253 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 TMEM222Q9H0R3 208 aa13.74□□□□□ -0.21
PHGDH-216ENST00000641375 A0A0D9SG52 128 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 B9A039 149 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 CYB5R3P00387 301 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-216ENST00000641375 HBZP02008 142 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 GZMHP20718 246 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 CD80P33681 288 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 ZNF345Q14585 488 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 TMUB2Q71RG4 321 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 AKR1E2Q96JD6 320 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 ARL6Q9H0F7 186 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 DYNLRB1Q9NP97 96 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 TNFSF18Q9UNG2 199 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 RBM7Q9Y580 266 aaKnown RBP13.73□□□□□ -0.21
PHGDH-216ENST00000641375 DSCAMO60469 2012 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 KALRNO60229 2985 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 PIGBOS1A0A0B4J2F0 54 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 NUPL2O15504 423 aaKnown RBP13.73□□□□□ -0.21
PHGDH-216ENST00000641375 H2AFB1P0C5Y9 115 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 EDDM3AQ14507 147 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 CDSNQ15517 529 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 IAH1Q2TAA2 248 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-216ENST00000641375 TEX36Q5VZQ5 186 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 GGNBP1Q5YKI7 109 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 STUMQ69YW2 141 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 SDSLQ96GA7 329 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 TOLLIPQ9H0E2 274 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 NCOR1P1Q9H4R4 102 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 UBE2J1Q9Y385 318 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-216ENST00000641375 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
PHGDH-216ENST00000641375 ROS1P08922 2347 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms