RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C6orf62Q9GZU0 229 aaPredicted RBP10.71□□□□□ -0.69
GTF3A-209ENST00000640289 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 OR2S2Q9NQN1 319 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 NDUFA13Q9P0J0 144 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 MGAT4AQ9UM21 535 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 MRPS7Q9Y2R9 242 aaKnown RBP10.71□□□□□ -0.69
GTF3A-209ENST00000640289 FAM96BQ9Y3D0 163 aa10.71□□□□□ -0.69
GTF3A-209ENST00000640289 NSD1Q96L73 2696 aaPredicted RBP10.71□□□□□ -0.7
GTF3A-209ENST00000640289 IGKV1-6A0A0C4DH72 117 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 MEIS3P1A6NDR6 274 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 POM121CA8CG34 1229 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 J3QR06 171 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 SLC31A2O15432 143 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 FCER2P06734 321 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 DTYMKP23919 212 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 PPP1CCP36873 323 aaKnown RBP10.7□□□□□ -0.7
GTF3A-209ENST00000640289 ZNF134P52741 427 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 HTD2P86397 168 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 HERPUD1Q15011 391 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 GVQW1Q8N7I0 195 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 ZNF439Q8NDP4 499 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 BEND2Q8NDZ0 799 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 ZNF596Q8TC21 504 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 ZNF418Q8TF45 676 aaPredicted RBP10.7□□□□□ -0.7
GTF3A-209ENST00000640289 NXF2Q9GZY0 626 aaKnown RBP10.7□□□□□ -0.7
GTF3A-209ENST00000640289 MMP28Q9H239 520 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 OR1A1Q9P1Q5 309 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 EXTL2Q9UBQ6 330 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 JPT1Q9UK76 154 aa10.7□□□□□ -0.7
GTF3A-209ENST00000640289 TBL2Q9Y4P3 447 aaKnown RBP10.7□□□□□ -0.7
GTF3A-209ENST00000640289 FABP7O15540 132 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 VENTXO95231 258 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 IFNA2P01563 188 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 FBP1P09467 338 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 HTR1DP28221 377 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 PRRX1P54821 245 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 PITPNAQ00169 270 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 TMEM30BQ3MIR4 351 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 MORN2Q502X0 79 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 PLA1AQ53H76 456 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 IGSF11Q5DX21 431 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 CNIH2Q6PI25 160 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 Q6YL49 198 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 SNX29P2Q8IUI4 249 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 ZDHHC16Q969W1 377 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 DUX5Q96PT3 197 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 PARP12Q9H0J9 701 aaKnown RBP10.69□□□□□ -0.7
GTF3A-209ENST00000640289 PRDM13Q9H4Q3 707 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 SLC23A1Q9UHI7 598 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 HILPDAQ9Y5L2 63 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 KIAA2026Q5HYC2 2103 aa10.69□□□□□ -0.7
GTF3A-209ENST00000640289 ZFHX3Q15911 3703 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 A6NHS1 94 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 BUB1B-PAK6H3BSN5 160 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 BET1O15155 118 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 HOXA3O43365 443 aaPredicted RBP10.68□□□□□ -0.7
GTF3A-209ENST00000640289 TCF21O43680 179 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 YPEL1O60688 119 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 KIR2DS4P43632 304 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 HILS1P60008 231 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 BAMBIQ13145 260 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 DIAPH2-AS1Q14236 149 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 KIR2DS1Q14954 304 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 SSX2Q16385 188 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 SRSF7Q16629 238 aaKnown RBP eCLIP10.68□□□□□ -0.7
GTF3A-209ENST00000640289 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 MINOS1Q5TGZ0 78 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 RBMS3Q6XE24 437 aaKnown RBP10.68□□□□□ -0.7
GTF3A-209ENST00000640289 LINC00311Q8N616 119 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 ZDHHC22Q8N966 263 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 OR4A4PQ8NGN8 299 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 CT45A3Q8NHU0 189 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 CABLES2Q9BTV7 478 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 TNFRSF19Q9NS68 423 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 DPM3Q9P2X0 92 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 MINOS1-NBL1R4GNA1 71 aa10.68□□□□□ -0.7
GTF3A-209ENST00000640289 DNAJC9-AS1A6NH13 148 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 LY6LH3BQJ8 138 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 IGHV4-59P01825 116 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 ZBTB25P24278 435 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 PRSS3P35030 304 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 CEACAM6P40199 344 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 Q3ZCU0 254 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
GTF3A-209ENST00000640289 TPTE2P1Q5T6R2 138 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 Q6ZS49 121 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
GTF3A-209ENST00000640289 HOGA1Q86XE5 327 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 LDLRAD3Q86YD5 345 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 BEST4Q8NFU0 473 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 OR10X1Q8NGY0 326 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 MALSU1Q96EH3 234 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 DIRAS2Q96HU8 199 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
GTF3A-209ENST00000640289 MEGF9Q9H1U4 602 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms