RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PTBP3O95758 552 aaKnown RBP18.1■□□□□ 0.49
CLN6-224ENST00000638076 OMGP23515 440 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 ZNF83P51522 516 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 AESQ08117 197 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 TMEM252Q8N6L7 170 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 S100PBPQ96BU1 408 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 GPR146Q96CH1 333 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 NKX6-2Q9C056 277 aaPredicted RBP18.1■□□□□ 0.49
CLN6-224ENST00000638076 SH3BGRL3Q9H299 93 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 UQCC1Q9NVA1 299 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 AKAP13Q12802 2813 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 MUC1P15941 1255 aaPredicted RBP18.09■□□□□ 0.49
CLN6-224ENST00000638076 OR3A1P47881 315 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 TAGLNQ01995 201 aaKnown RBP18.09■□□□□ 0.49
CLN6-224ENST00000638076 ZNF273Q14593 569 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 CLINT1Q14677 625 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 C1orf185Q5T7R7 199 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 SLC35E4Q6ICL7 350 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 OR1L1Q8NH94 360 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 SLC25A31Q9H0C2 315 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 WASF3Q9UPY6 502 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 MGAQ8IWI9 3026 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 PIGBOS1A0A0B4J2F0 54 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 WRBO00258 174 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 CHST1O43916 411 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 TMEM50AO95807 157 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 IGKV1-39P01597 117 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 IGKV1D-39P04432 117 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 DANCRP0C864 163 aa18.09■□□□□ 0.49
CLN6-224ENST00000638076 RNASE11Q8TAA1 199 aaKnown RBP18.09■□□□□ 0.49
CLN6-224ENST00000638076 C12orf77C9JDV5 145 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 M0R1B8 84 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 CRYABP02511 175 aaKnown RBP18.08■□□□□ 0.48
CLN6-224ENST00000638076 ZNF16P17020 682 aaPredicted RBP18.08■□□□□ 0.48
CLN6-224ENST00000638076 MSMPQ1L6U9 139 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 PRR7Q8TB68 274 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 GALMQ96C23 342 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 COQ2Q96H96 371 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 RNF115Q9Y4L5 304 aa18.08■□□□□ 0.48
CLN6-224ENST00000638076 PITX3O75364 302 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 GUCA2BQ16661 112 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 IZUMO4Q1ZYL8 232 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 SMIM21Q3B7S5 101 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 TIMM23BQ5SRD1 257 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 LRP11Q86VZ4 500 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 SVBPQ8N300 66 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 DRAM1Q8N682 238 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 OR2Z1Q8NG97 314 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 LYPD6BQ8NI32 183 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 DUSP13Q9UII6 198 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 METRNQ9UJH8 293 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 A0A1B0GU03 582 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 A0A1B0GWJ7 208 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 OOEPA6NGQ2 149 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 MMP9P14780 707 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 GABRA2P47869 451 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 EIF2S3LQ2VIR3 472 aaKnown RBP18.07■□□□□ 0.48
CLN6-224ENST00000638076 C10orf91Q5T1B1 145 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 ODF3L1Q8IXM7 274 aa18.07■□□□□ 0.48
CLN6-224ENST00000638076 LIN7CQ9NUP9 197 aaKnown RBP18.07■□□□□ 0.48
CLN6-224ENST00000638076 DNASE2O00115 360 aaPredicted RBP18.06■□□□□ 0.48
CLN6-224ENST00000638076 SLC25A6P12236 298 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 FHITP49789 147 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 COL10A1Q03692 680 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 ZNF266Q14584 549 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 Q6ZRM9 215 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 PUSL1Q8N0Z8 303 aaKnown RBP18.06■□□□□ 0.48
CLN6-224ENST00000638076 LRRC29Q8WV35 223 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 TMEM171Q8WVE6 324 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 KIAA2026Q5HYC2 2103 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 RNASEK-C17orf49H0YIS7 233 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 CST7O76096 145 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 IL2RGP31785 369 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 TIMP3P35625 211 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 SPAG16Q8N0X2 631 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 OR5C1Q8NGR4 320 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 MRGPRDQ8TDS7 321 aa18.06■□□□□ 0.48
CLN6-224ENST00000638076 CARHSP1Q9Y2V2 147 aaKnown RBP18.06■□□□□ 0.48
CLN6-224ENST00000638076 HEATR1Q9H583 2144 aaKnown RBP18.06■□□□□ 0.48
CLN6-224ENST00000638076 HBZP02008 142 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 PAX9P55771 341 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 MZT1Q08AG7 82 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 ZNF616Q08AN1 781 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 ZNF585BQ52M93 769 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 TPRX1Q8N7U7 411 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 OR52L2PQ8NGH6 319 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 ESRP2Q9H6T0 727 aaKnown RBP18.05■□□□□ 0.48
CLN6-224ENST00000638076 CACFD1Q9UGQ2 172 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 FAM74A7A6NL05 159 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 IFNL4K9M1U5 179 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 C1QL1O75973 258 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 PRH1P02810 166 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 CAMLGP49069 296 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 FAM74A3Q4VXF1 159 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 KRBOX4Q5JUW0 171 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 FAM53AQ6NSI3 398 aaPredicted RBP18.05■□□□□ 0.48
CLN6-224ENST00000638076 TMEM217Q8N7C4 229 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 LSM10Q969L4 123 aaKnown RBP18.05■□□□□ 0.48
CLN6-224ENST00000638076 SEC11CQ9BY50 192 aa18.05■□□□□ 0.48
CLN6-224ENST00000638076 TSPAN15O95858 294 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms