RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	PPIAL4F	P0DN26	164 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	NPBWR2	P48146	333 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	ERVS71-1	P61550	626 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	UBE2V2	Q15819	145 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	PRR27	Q6MZM9	219 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	RPUSD3	Q6P087	351 aa	Known RBP	12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	ETV3L	Q6ZN32	361 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	LYZL2	Q7Z4W2	148 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	ADAD2	Q8NCV1	583 aa	Known RBP	12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	KLF14	Q8TD94	323 aa	Predicted RBP	12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	PPIAL4A	Q9Y536	164 aa		12.34	□□□□□ -0.43
NEDD4L-238	ENST00000635997	GZMH	P20718	246 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SCAND1	P57086	179 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SPIC	Q8N5J4	248 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	NECAP1	Q8NC96	275 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	KCNIP2	Q9NS61	270 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997		A0A0U1RQV5	110 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PPP1R2P9	O14990	202 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	COL10A1	Q03692	680 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	NCMAP	Q5T1S8	102 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OVCH2	Q7RTZ1	564 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	BMPER	Q8N8U9	685 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR8B3	Q8NGG8	313 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MRPL24	Q96A35	216 aa	Known RBP	12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ABHD14B	Q96IU4	210 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR8B2	Q96RD0	313 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	IGKV3-7	A0A075B6H7	116 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF727	A8MUV8	499 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TGFA	P01135	160 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMEM255A	Q5JRV8	349 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF787	Q6DD87	383 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	LPAR5	Q9H1C0	372 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF665	Q9H7R5	613 aa		12.33	□□□□□ -0.44
NEDD4L-238	ENST00000635997	COX5A	P20674	150 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TNXA	Q16473	311 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	HIST2H3A	Q71DI3	136 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SHISA3	A0PJX4	238 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	C7orf66	A4D0T2	115 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TAAR5	O14804	337 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SNRPC	P09234	159 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RBM11	P57052	281 aa	Known RBP	12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CEACAM21	Q3KPI0	293 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MEGF10	Q96KG7	1140 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	WIPI2	Q9Y4P8	454 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	KCNAB3	O43448	404 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SCT	P09683	121 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SMIM6	P0DI80	62 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	UBE2G1	P62253	170 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	GUCA2B	Q16661	112 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MPV17L	Q2QL34	196 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM222B	Q8WU58	562 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	C10orf35	Q96D05	121 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	INSIG2	Q9Y5U4	225 aa		12.32	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMEM218	A2RU14	115 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMEM229A	B2RXF0	380 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PHOX2A	O14813	284 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF705D	P0CH99	300 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF705B	P0CI00	300 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TGIF2LY	Q8IUE0	185 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TGIF2LX	Q8IUE1	241 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR2C3	Q8N628	320 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ZNF418	Q8TF45	676 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SAMD10	Q9BYL1	202 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CA10	Q9NS85	328 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	JMJD1C	Q15652	2540 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997		A0A087WV48	116 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MB	P02144	154 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	MDH2	P40926	338 aa	Known RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PRRX1	P54821	245 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM206A	Q9NX38	181 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CBY1	Q9Y3M2	126 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FANCM	Q8IYD8	2048 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	IGHV3-21	A0A0B4J1V1	117 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997		A0A1W2PNV4	684 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	EIF3G	O75821	320 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	FAM201A	Q5SY85	155 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	RPS4Y2	Q8TD47	263 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	LEAP2	Q969E1	77 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	AKR1E2	Q96JD6	320 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ACTR3C	Q9C0K3	210 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PATZ1	Q9HBE1	687 aa	Known RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	GAB2	Q9UQC2	676 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	PINLYP	A6NC86	204 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	DVL1	O14640	695 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CYB5R3	P00387	301 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	DVL1P1	P54792	670 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	ACSM6	Q6P461	480 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OR52L2P	Q8NGH6	319 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	BSCL2	Q96G97	398 aa	Predicted RBP	12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	UQCC1	Q9NVA1	299 aa		12.31	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TANC1	Q9C0D5	1861 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	CHST1	O43916	411 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	IFI6	P09912	130 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMEM56	Q96MV1	263 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	TMUB1	Q9BVT8	246 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	HILPDA	Q9Y5L2	63 aa		12.3	□□□□□ -0.44
NEDD4L-238	ENST00000635997	OOEP	A6NGQ2	149 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms