RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 NHLRC3Q5JS37 347 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 SLC25A30Q5SVS4 291 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 FAM27D1Q5T7N8 215 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 SYT6Q5T7P8 510 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-206ENST00000634451 DDI2Q5TDH0 399 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 C1orf146Q5VVC0 180 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 SYS1Q8N2H4 156 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 OR52I1Q8NGK6 324 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 CENPNQ96H22 339 aaPredicted RBP9.92□□□□□ -0.82
LINC00339-206ENST00000634451 TOLLIPQ9H0E2 274 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 METTL9Q9H1A3 318 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 KIAA1456Q9P272 454 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
LINC00339-206ENST00000634451 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
LINC00339-206ENST00000634451 LALBAP00709 142 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 LIMS3P0CW19 117 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 LIMS4P0CW20 117 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 IGHV4-30-4P0DP06 118 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF93P35789 620 aaPredicted RBP9.91□□□□□ -0.82
LINC00339-206ENST00000634451 PPP1CCP36873 323 aaKnown RBP9.91□□□□□ -0.82
LINC00339-206ENST00000634451 INSL3P51460 131 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 LRRC36Q1X8D7 754 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 OR2G6Q5TZ20 316 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF429Q86V71 674 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 Q8N1Y9 231 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 MINDY2Q8NBR6 621 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 OR8H1Q8NGG4 311 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 TRUB1Q8WWH5 349 aaKnown RBP9.91□□□□□ -0.82
LINC00339-206ENST00000634451 PYDC1Q8WXC3 89 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 NABP2Q9BQ15 211 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 IL36GQ9NZH8 169 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF580Q9UK33 172 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 GAB2Q9UQC2 676 aa9.91□□□□□ -0.82
LINC00339-206ENST00000634451 TRAV8-7A0A075B6U6 113 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 A0A1W2PN81 502 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 FCN1O00602 326 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 MAGEB3O15480 346 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 LANCL1O43813 399 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 CHRNA7P36544 502 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 SMN1Q16637 294 aaKnown RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 ACSM6Q6P461 480 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 APH1BQ8WW43 257 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 TMEM106AQ96A25 262 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 ZNF184Q99676 751 aaPredicted RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 FAM103A1Q9BTL3 118 aaKnown RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 PARP12Q9H0J9 701 aaKnown RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 FBXL15Q9H469 300 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 BANF2Q9H503 90 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 RETNQ9HD89 108 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 ETAA1Q9NY74 926 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 RCC2Q9P258 522 aaKnown RBP9.9□□□□□ -0.82
LINC00339-206ENST00000634451 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
LINC00339-206ENST00000634451 A0A1W2PPK0 400 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 UBE2QL1A1L167 161 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 LINC01619G3V211 115 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 H3BNX3 289 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 NBR2O15453 112 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
LINC00339-206ENST00000634451 OR5H8P0DN80 308 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 FCGR1AP12314 374 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 BDKRB2P30411 391 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 GBX2P52951 348 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-206ENST00000634451 DEFA5Q01523 94 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 DOC2BQ14184 412 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 MPV17LQ2QL34 196 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 MORN2Q502X0 79 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 MEDAGQ5VYS4 303 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 RAB12Q6IQ22 244 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
LINC00339-206ENST00000634451 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 MUL1Q969V5 352 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 MS4A10Q96PG2 267 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 KRTAP17-1Q9BYP8 105 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 ZMAT4Q9H898 229 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 TAF9BQ9HBM6 251 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 TMEM138Q9NPI0 162 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 OR2S2Q9NQN1 319 aa9.89□□□□□ -0.83
LINC00339-206ENST00000634451 SAA2-SAA4A0A096LPE2 208 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 TXNL1O43396 289 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 LGALS1P09382 135 aaKnown RBP9.88□□□□□ -0.83
LINC00339-206ENST00000634451 SAA2P0DJI9 122 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-206ENST00000634451 IGFBP3P17936 291 aaPredicted RBP9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ETV1P50549 477 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 FAM131AQ6UXB0 335 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 GAPTQ8N292 157 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 CBR4Q8N4T8 237 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 GPR148Q8TDV2 347 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ZNF251Q9BRH9 671 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ABHD14AQ9BUJ0 271 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 C19orf73Q9NVV2 129 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ADAM30Q9UKF2 790 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 GMPPBQ9Y5P6 360 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ALMS1Q8TCU4 4167 aa9.88□□□□□ -0.83
LINC00339-206ENST00000634451 ST8SIA5O15466 376 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms