RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 SLC7A6OSQ96CW6 309 aaPredicted RBP12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 TOLLIPQ9H0E2 274 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 OAZ3Q9UMX2 235 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 ERGIC3Q9Y282 383 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 MRPS28Q9Y2Q9 187 aaKnown RBP12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 HYDINQ4G0P3 5121 aa12.08□□□□□ -0.48
PDLIM3-213ENST00000629667 A0A1W2PN81 502 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 E9PI62 339 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 CD2P06729 351 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 CNTFRP26992 372 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 BLVRBP30043 206 aaPredicted RBP12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 ZNF93P35789 620 aaPredicted RBP12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 CHRNA7P36544 502 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 VEGFCP49767 419 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 SNRPGP62308 76 aaKnown RBP12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 C6orf183Q5T699 404 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 STEAP3Q658P3 488 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 LIN54Q6MZP7 749 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 MINDY2Q8NBR6 621 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 LGALS12Q96DT0 336 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 JAM3Q9BX67 310 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
PDLIM3-213ENST00000629667 IGHV4OR15-8A0A075B7B6 117 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 A0A087WW49 117 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 MCRIP1C9JLW8 97 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 NBR2O15453 112 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 ZNF780AO75290 641 aaPredicted RBP12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 HBZP02008 142 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 LGALS1P09382 135 aaKnown RBP12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 GTF2F2P13984 249 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 PPP3R1P63098 170 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 C5orf64Q2M2E5 130 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 DDI2Q5TDH0 399 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 LYPD6Q86Y78 171 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 RITA1Q96K30 269 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 TMEM138Q9NPI0 162 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 KIAA1456Q9P272 454 aa12.06□□□□□ -0.48
PDLIM3-213ENST00000629667 SAC3D1A6NKF1 404 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 SLC22A6Q4U2R8 563 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 Q8N1Y9 231 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 OR1L1Q8NH94 360 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 GPR148Q8TDV2 347 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 CASTOR1Q8WTX7 329 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 TMEM106AQ96A25 262 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 FLYWCH2Q96CP2 140 aaKnown RBP12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 CENPNQ96H22 339 aaPredicted RBP12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 CST11Q9H112 138 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 SPACA1Q9HBV2 294 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 OR2S2Q9NQN1 319 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 TPSG1Q9NRR2 321 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 ERVK13-1Q9NX77 482 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 FOXA2Q9Y261 457 aaPredicted RBP12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 ORC6Q9Y5N6 252 aa12.05□□□□□ -0.48
PDLIM3-213ENST00000629667 A0A1W2PP11 408 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 HSPA12AO43301 675 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 SOX15O60248 233 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 FADS2O95864 444 aaKnown RBP12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 HSPB1P04792 205 aaKnown RBP12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 BDKRB2P30411 391 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 MORN2Q502X0 79 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 TCTEX1D1Q8N7M0 179 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 ELOVL1Q9BW60 279 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 C19orf73Q9NVV2 129 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 AASSQ9UDR5 926 aa12.04□□□□□ -0.48
PDLIM3-213ENST00000629667 A8MZ25 164 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 JTBO76095 146 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 IGHV3-11P01762 117 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 GTF2A1P52655 376 aaPredicted RBP12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 ADARB1P78563 741 aaKnown RBP12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 GPR176Q14439 515 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 ANKRD13BQ86YJ7 626 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 NPBQ8NG41 125 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 ABHD5Q8WTS1 349 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 RSRP1Q9BUV0 290 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 STUB1Q9UNE7 303 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 FBXO7Q9Y3I1 522 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 A3GALT2U3KPV4 340 aa12.03□□□□□ -0.48
PDLIM3-213ENST00000629667 NDUFA3O95167 84 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 IFNA6P05013 189 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 NDPQ00604 133 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 TMEM267Q0VDI3 215 aaPredicted RBP12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 ZIK1Q3SY52 487 aaPredicted RBP12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 C19orf54Q5BKX5 351 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 C1orf146Q5VVC0 180 aa12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 ZNF660Q6AZW8 331 aaPredicted RBP12.02□□□□□ -0.49
PDLIM3-213ENST00000629667 RAB12Q6IQ22 244 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms