RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 AICDAQ9GZX7 198 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 NPIPA1Q9UND3 350 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 R4GMQ9 66 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 ATG2BQ96BY7 2078 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 A0A0A6YYD4 124 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 PRSS37A4D1T9 235 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 G3V3Y1 287 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 ZNF728P0DKX0 622 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 ESDP10768 282 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 IL12BP29460 328 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 PSMB3P49720 205 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 TMEM50BP56557 158 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 RPS4XP62701 263 aaKnown RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 PHLDA2Q53GA4 152 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 SPIN3Q5JUX0 258 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 FIGLAQ6QHK4 219 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 LINC00114Q6XXX2 140 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 ATOH7Q8N100 152 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 TSTD1Q8NFU3 115 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 OR51T1Q8NGJ9 327 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 GPER1Q99527 375 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 RBM24Q9BX46 236 aaKnown RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 WASHC3Q9Y3C0 194 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 DOCK9Q9BZ29 2069 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 LINC01553A4QN01 128 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 C4orf51C9J302 202 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 SLC33A1O00400 549 aaPredicted RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 PHF1O43189 567 aaPredicted RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 NRASP01111 189 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 KRASP01116 189 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 SCGB1A1P11684 91 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 FXYD4P59646 89 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 CD226Q15762 336 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 EMC4Q5J8M3 183 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 LYPD6Q86Y78 171 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 FAM58AQ8N1B3 248 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 RAB42Q8N4Z0 105 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 MRPL30Q8TCC3 161 aaKnown RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 C11orf40Q8WZ69 217 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 LHX4Q969G2 390 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 ZNF286AQ9HBT8 521 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 NRN1Q9NPD7 142 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
VPS11-209ENST00000622309 ABI3Q9P2A4 366 aa6.83□□□□□ -1.32
VPS11-209ENST00000622309 NCOR1O75376 2440 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 BDP1A6H8Y1 2624 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 PROB1E7EW31 1015 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TTRP02766 147 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 CTSEP14091 401 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 PMCHP20382 165 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 BAXQ07812 192 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 ZNF154Q13106 437 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 STUMQ69YW2 141 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 OR4F5Q8NH21 305 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SARAFQ96BY9 339 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 OR4F4Q96R69 305 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 OR10A2Q9H208 303 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TP53TG3Q9ULZ0 132 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 TCF20Q9UGU0 1960 aaKnown RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 KIF26BQ2KJY2 2108 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TMEM250H0YL14 139 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 K7ESM1 405 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TAX1BP3O14907 124 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 GPX1P07203 203 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 BCL6P41182 706 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 GPR1P46091 355 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 RAB9AP51151 201 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 ROM1Q03395 351 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TMEM215Q68D42 235 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 ZAR1Q86SH2 424 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 MUC15Q8N387 334 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 RNF152Q8N8N0 203 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TMEM116Q8NCL8 245 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 BORCS7Q96B45 105 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 DDIT4LQ96D03 193 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 C18orf12Q96KH6 178 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TSPAN32Q96QS1 320 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SPIN2AQ99865 258 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SPIN2BQ9BPZ2 258 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 FBLN5Q9UBX5 448 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 POLR1DQ9Y2S0 133 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 TRIOO75962 3097 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SPEGQ15772 3267 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 GAGE10A6NGK3 116 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 ZNF850A8MQ14 1090 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 M0R1X1 148 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SLC16A7O60669 478 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 CFIP05156 583 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 BLVRBP30043 206 aaPredicted RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 RPL18Q07020 188 aaKnown RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 TMEM267Q0VDI3 215 aaPredicted RBP6.82□□□□□ -1.32
VPS11-209ENST00000622309 TCF24Q7RTU0 167 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 Q8N976 141 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 SGMS2Q8NHU3 365 aa6.82□□□□□ -1.32
VPS11-209ENST00000622309 PECRQ9BY49 303 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms