RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ZNF230Q9UIE0 474 aaPredicted RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 RPUSD1Q9UJJ7 312 aaKnown RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 ZNF391Q9UJN7 358 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 ARAP3Q8WWN8 1544 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 ROCK2O75116 1388 aaKnown RBP2.46□□□□□ -2.02
CPNE3-213ENST00000622183 TICRRQ7Z2Z1 1910 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 ANKRD30AQ9BXX3 1397 aa2.46□□□□□ -2.02
CPNE3-213ENST00000622183 SCAPERQ9BY12 1400 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PLXNB3Q9ULL4 1909 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 TRBV24-1A0A075B6N3 115 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 TMEM210A6NLX4 147 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 SH2D1AO60880 128 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 HMGN1P05114 100 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 P0C880 135 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PET100P0DJ07 73 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PSKH1P11801 424 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 CTSEP14091 401 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 ZNF708P17019 499 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 F8A1P23610 371 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 FADDQ13158 208 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 CENPWQ5EE01 88 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PTRHD1Q6GMV3 140 aaKnown RBP2.45□□□□□ -2.02
CPNE3-213ENST00000622183 XKRXQ6PP77 449 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 TCF23Q7RTU1 214 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 AKAP14Q86UN6 197 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 OR52E4Q8NGH9 312 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 CDC26Q8NHZ8 85 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 STOML3Q8TAV4 291 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 GALMQ96C23 342 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 C7orf50Q9BRJ6 194 aaKnown RBP2.45□□□□□ -2.02
CPNE3-213ENST00000622183 ZNF426Q9BUY5 554 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 POTEKPQ9BYX7 375 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 ARL6Q9H0F7 186 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PAIP2BQ9ULR5 123 aaKnown RBP2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PHLDA3Q9Y5J5 127 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 ABCC11Q96J66 1382 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 MAP3K5Q99683 1374 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 PLB1Q6P1J6 1458 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 SCN4AP35499 1836 aa2.45□□□□□ -2.02
CPNE3-213ENST00000622183 SPATA31E1Q6ZUB1 1445 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 IGKV1D-37A0A075B6S9 117 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 A0A1B0GU33 70 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 FTCDNL1E5RQL4 147 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 ITGB1BP1O14713 200 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 SLC31A1O15431 190 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 ATP8B1O43520 1251 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 TRAPPC3O43617 180 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 NDUFA2O43678 99 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 SYNGR2O43760 224 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 OPN1SWP03999 348 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 GADD45AP24522 165 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 CLEC12BQ2HXU8 276 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 PP632Q6XCG6 107 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 SPNS3Q6ZMD2 512 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 LYPD6Q86Y78 171 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 STX12Q86Y82 276 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 LRRC34Q8IZ02 419 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 BLIDQ8IZY5 108 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 OR8K1Q8NGG5 319 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 OR5K1Q8NHB7 308 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 RAD51AP1Q96B01 352 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 OPTNQ96CV9 577 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 SMIM12Q96EX1 92 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 IGF2BP2-AS1Q96M15 143 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 PKMYT1Q99640 499 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 TRIM4Q9C037 500 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 CENPHQ9H3R5 247 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 PARVBQ9HBI1 364 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 ZNF286AQ9HBT8 521 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 TMEM216Q9P0N5 145 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 LINC00588Q9Y4M8 146 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 UHRF1BP1LA0JNW5 1464 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 NCAPD3P42695 1498 aa2.44□□□□□ -2.02
CPNE3-213ENST00000622183 GOLGA8MH3BSY2 632 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 M0QYV0 167 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 CIAO1O76071 339 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 ASS1P00966 412 aaKnown RBP2.43□□□□□ -2.02
CPNE3-213ENST00000622183 RAB14P61106 215 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 TAF9Q16594 264 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 PYCR3Q53H96 274 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 PYDC2Q56P42 97 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 C10orf91Q5T1B1 145 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 SDHAF4Q5VUM1 108 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 EBLN2Q6P2I7 272 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 PLEKHG7Q6ZR37 379 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 C3orf62Q6ZUJ4 267 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 ZBTB8OSQ8IWT0 167 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 C2orf73Q8N5S3 287 aaPredicted RBP2.43□□□□□ -2.02
CPNE3-213ENST00000622183 Q8NAQ8 132 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 OR11G2Q8NGC1 345 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 ZNRF2Q8NHG8 242 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 CMTM2Q8TAZ6 248 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 TEX47Q8TBZ9 253 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 TAMM41Q96BW9 452 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 SLC25A44Q96H78 314 aaPredicted RBP2.43□□□□□ -2.02
CPNE3-213ENST00000622183 RBP7Q96R05 134 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 DCUN1D5Q9BTE7 237 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 BCL2L14Q9BZR8 327 aa2.43□□□□□ -2.02
CPNE3-213ENST00000622183 C6orf62Q9GZU0 229 aaPredicted RBP2.43□□□□□ -2.02
CPNE3-213ENST00000622183 HDHD2Q9H0R4 259 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms